Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF3Q9HD45 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 AC098590.1-201ENST00000468126 897 ntBASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 RPS2P52-201ENST00000469610 820 ntBASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 AC092053.2-201ENST00000640557 1818 ntBASIC20.74■□□□□ 0.91
TM9SF3Q9HD45 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF3Q9HD45 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 LSM12P1-201ENST00000411836 588 ntBASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TM9SF3Q9HD45 C11orf96-202ENST00000528572 1834 ntBASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 AC006058.3-201ENST00000606217 1069 ntBASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF3Q9HD45 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms