Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 AC012306.2-201ENST00000609350 630 ntBASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRPM3Q9HCF6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRPM3Q9HCF6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 FAM99A-202ENST00000538190 1989 ntBASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 AC239809.2-201ENST00000415381 517 ntBASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 AC113410.3-201ENST00000623366 203 ntBASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 AC127496.7-201ENST00000625110 1798 ntBASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 AC087499.1-201ENST00000418141 1075 ntBASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
TRPM3Q9HCF6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TRPM3Q9HCF6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
TRPM3Q9HCF6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TRPM3Q9HCF6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC28.2■■■□□ 2.1
TRPM3Q9HCF6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRPM3Q9HCF6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRPM3Q9HCF6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TRPM3Q9HCF6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC28.2■■■□□ 2.1
TRPM3Q9HCF6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC28.2■■■□□ 2.1
TRPM3Q9HCF6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRPM3Q9HCF6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 ABHD17AP6-201ENST00000458502 1044 ntBASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TRPM3Q9HCF6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 RCN1P1-201ENST00000400413 996 ntBASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 KRT18P21-201ENST00000515767 1272 ntBASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC28.18■■■□□ 2.1
TRPM3Q9HCF6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms