Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.15■■□□□ 1.14
VRTNQ9H8Y1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
VRTNQ9H8Y1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
VRTNQ9H8Y1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.14■■□□□ 1.14
VRTNQ9H8Y1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 AL512625.2-201ENST00000417533 625 ntBASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
VRTNQ9H8Y1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 NCF1B-203ENST00000435988 1254 ntBASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 AC069236.1-201ENST00000604339 616 ntBASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VRTNQ9H8Y1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 AC006970.2-201ENST00000450065 779 ntBASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 AC100791.3-201ENST00000617619 330 ntBASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.12■■□□□ 1.13
VRTNQ9H8Y1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 AC121338.2-201ENST00000622535 1744 ntBASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VRTNQ9H8Y1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 AC005229.4-201ENST00000610085 2198 ntBASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 AC008694.1-202ENST00000636953 945 ntBASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VRTNQ9H8Y1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
VRTNQ9H8Y1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VRTNQ9H8Y1 AL121832.2-201ENST00000610979 668 ntBASIC22.09■■□□□ 1.13
VRTNQ9H8Y1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.09■■□□□ 1.13
VRTNQ9H8Y1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
VRTNQ9H8Y1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms