Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 UBE2DNL-204ENST00000602536 740 ntBASIC20.04■□□□□ 0.8
SOX17Q9H6I2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX17Q9H6I2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 LINC01006-201ENST00000333319 2292 ntBASIC20.03■□□□□ 0.8
SOX17Q9H6I2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX17Q9H6I2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SOX17Q9H6I2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SOX17Q9H6I2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SOX17Q9H6I2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SOX17Q9H6I2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SOX17Q9H6I2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SOX17Q9H6I2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20■□□□□ 0.79
SOX17Q9H6I2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20■□□□□ 0.79
SOX17Q9H6I2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20■□□□□ 0.79
SOX17Q9H6I2 AC026185.1-201ENST00000445748 174 ntBASIC20■□□□□ 0.79
SOX17Q9H6I2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20■□□□□ 0.79
SOX17Q9H6I2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SOX17Q9H6I2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20■□□□□ 0.79
SOX17Q9H6I2 MFSD11-216ENST00000590393 1141 ntBASIC20■□□□□ 0.79
SOX17Q9H6I2 RAP2CP1-201ENST00000605103 478 ntBASIC20■□□□□ 0.79
SOX17Q9H6I2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20■□□□□ 0.79
SOX17Q9H6I2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20■□□□□ 0.79
SOX17Q9H6I2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SOX17Q9H6I2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 AC010141.2-201ENST00000452426 721 ntBASIC19.99■□□□□ 0.79
SOX17Q9H6I2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.99■□□□□ 0.79
SOX17Q9H6I2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms