Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 AC013268.1-206ENST00000638368 961 ntBASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 AC112229.1-201ENST00000639295 961 ntBASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1EQ9GZS1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 AC091799.1-201ENST00000422823 811 ntBASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1EQ9GZS1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
POLR1EQ9GZS1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 DUX4L16-201ENST00000555130 1264 ntBASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1EQ9GZS1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
POLR1EQ9GZS1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLR1EQ9GZS1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1EQ9GZS1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
POLR1EQ9GZS1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21■□□□□ 0.95
POLR1EQ9GZS1 AC004911.1-201ENST00000416316 871 ntBASIC21■□□□□ 0.95
POLR1EQ9GZS1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21■□□□□ 0.95
POLR1EQ9GZS1 AC007322.4-201ENST00000509611 723 ntBASIC21■□□□□ 0.95
POLR1EQ9GZS1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21■□□□□ 0.95
POLR1EQ9GZS1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1EQ9GZS1 AC121338.2-201ENST00000622535 1744 ntBASIC21■□□□□ 0.95
POLR1EQ9GZS1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1EQ9GZS1 AC116050.2-201ENST00000612102 1779 ntBASIC21■□□□□ 0.95
POLR1EQ9GZS1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1EQ9GZS1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 AC011484.1-201ENST00000377652 1995 ntBASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1EQ9GZS1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 AC092666.2-201ENST00000613287 246 ntBASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 AC231657.2-201ENST00000624556 255 ntBASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
POLR1EQ9GZS1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR1EQ9GZS1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1EQ9GZS1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR1EQ9GZS1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1EQ9GZS1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1EQ9GZS1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
POLR1EQ9GZS1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms