Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
PHACTR1Q9C0D0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PHACTR1Q9C0D0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PHACTR1Q9C0D0 AC135279.3-201ENST00000610945 1311 ntBASIC21.02■□□□□ 0.95
PHACTR1Q9C0D0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.02■□□□□ 0.95
PHACTR1Q9C0D0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 FP700111.2-201ENST00000619190 1892 ntBASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 AC008406.3-201ENST00000620001 1374 ntBASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 AC027682.1-201ENST00000562846 899 ntBASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
PHACTR1Q9C0D0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHACTR1Q9C0D0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 AL512408.1-201ENST00000569378 2000 ntBASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 MIR572-201ENST00000384983 95 ntBASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHACTR1Q9C0D0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 TSPY26P-201ENST00000476365 1326 ntBASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PHACTR1Q9C0D0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 AC099791.1-201ENST00000416440 715 ntBASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PHACTR1Q9C0D0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms