Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USB1Q9BQ65 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 GPX1P1-201ENST00000388829 606 ntBASIC18.41■□□□□ 0.54
USB1Q9BQ65 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 AL162412.1-201ENST00000567129 965 ntBASIC18.41■□□□□ 0.54
USB1Q9BQ65 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 AL121832.2-201ENST00000610979 668 ntBASIC18.41■□□□□ 0.54
USB1Q9BQ65 AC243732.1-201ENST00000612648 864 ntBASIC18.41■□□□□ 0.54
USB1Q9BQ65 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USB1Q9BQ65 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USB1Q9BQ65 AC003102.1-202ENST00000563394 1796 ntBASIC18.4■□□□□ 0.54
USB1Q9BQ65 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USB1Q9BQ65 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.4■□□□□ 0.54
USB1Q9BQ65 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USB1Q9BQ65 AL137060.1-201ENST00000618151 2648 ntBASIC18.39■□□□□ 0.54
USB1Q9BQ65 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USB1Q9BQ65 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 MIR663A-201ENST00000385250 93 ntBASIC18.39■□□□□ 0.53
USB1Q9BQ65 HLA-L-209ENST00000420110 1011 ntBASIC18.39■□□□□ 0.53
USB1Q9BQ65 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USB1Q9BQ65 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 AC133552.2-202ENST00000575694 574 ntBASIC18.39■□□□□ 0.53
USB1Q9BQ65 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.39■□□□□ 0.53
USB1Q9BQ65 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USB1Q9BQ65 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
USB1Q9BQ65 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USB1Q9BQ65 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USB1Q9BQ65 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.39■□□□□ 0.53
USB1Q9BQ65 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
USB1Q9BQ65 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
USB1Q9BQ65 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
USB1Q9BQ65 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USB1Q9BQ65 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.38■□□□□ 0.53
USB1Q9BQ65 SLC7A5P2-201ENST00000553010 536 ntBASIC18.38■□□□□ 0.53
USB1Q9BQ65 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USB1Q9BQ65 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.38■□□□□ 0.53
USB1Q9BQ65 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.38■□□□□ 0.53
USB1Q9BQ65 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USB1Q9BQ65 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USB1Q9BQ65 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.38■□□□□ 0.53
USB1Q9BQ65 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USB1Q9BQ65 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 AL109923.1-201ENST00000618799 583 ntBASIC18.37■□□□□ 0.53
USB1Q9BQ65 AC008694.1-202ENST00000636953 945 ntBASIC18.37■□□□□ 0.53
USB1Q9BQ65 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USB1Q9BQ65 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.37■□□□□ 0.53
USB1Q9BQ65 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms