Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP4Q99727 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP4Q99727 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP4Q99727 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TIMP4Q99727 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TIMP4Q99727 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TIMP4Q99727 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMP4Q99727 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMP4Q99727 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
TIMP4Q99727 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMP4Q99727 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMP4Q99727 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TIMP4Q99727 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP4Q99727 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP4Q99727 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP4Q99727 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMP4Q99727 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMP4Q99727 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP4Q99727 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMP4Q99727 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP4Q99727 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP4Q99727 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP4Q99727 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP4Q99727 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.02■□□□□ 0.64
TIMP4Q99727 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TIMP4Q99727 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP4Q99727 MIR663A-201ENST00000385250 93 ntBASIC19.02■□□□□ 0.64
TIMP4Q99727 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMP4Q99727 AC007322.1-201ENST00000426983 750 ntBASIC19.02■□□□□ 0.64
TIMP4Q99727 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.02■□□□□ 0.64
TIMP4Q99727 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMP4Q99727 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.02■□□□□ 0.64
TIMP4Q99727 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMP4Q99727 AC008175.2-201ENST00000612840 297 ntBASIC19.02■□□□□ 0.64
TIMP4Q99727 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TIMP4Q99727 AC010536.3-201ENST00000620306 533 ntBASIC19.02■□□□□ 0.64
TIMP4Q99727 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP4Q99727 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TIMP4Q99727 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP4Q99727 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TIMP4Q99727 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TIMP4Q99727 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TIMP4Q99727 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.02■□□□□ 0.63
TIMP4Q99727 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.02■□□□□ 0.63
TIMP4Q99727 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.01■□□□□ 0.63
TIMP4Q99727 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 NCF1B-203ENST00000435988 1254 ntBASIC19.01■□□□□ 0.63
TIMP4Q99727 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.01■□□□□ 0.63
TIMP4Q99727 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TIMP4Q99727 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP4Q99727 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TIMP4Q99727 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP4Q99727 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19■□□□□ 0.63
TIMP4Q99727 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP4Q99727 POU5F1P4-201ENST00000413175 1085 ntBASIC19■□□□□ 0.63
TIMP4Q99727 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP4Q99727 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19■□□□□ 0.63
TIMP4Q99727 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19■□□□□ 0.63
TIMP4Q99727 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19■□□□□ 0.63
TIMP4Q99727 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TIMP4Q99727 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP4Q99727 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP4Q99727 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP4Q99727 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP4Q99727 LINC01521-201ENST00000504184 1943 ntBASIC19■□□□□ 0.63
TIMP4Q99727 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMP4Q99727 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP4Q99727 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP4Q99727 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP4Q99727 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP4Q99727 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP4Q99727 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMP4Q99727 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP4Q99727 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.99■□□□□ 0.63
TIMP4Q99727 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMP4Q99727 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.99■□□□□ 0.63
TIMP4Q99727 AC120498.10-201ENST00000621827 505 ntBASIC18.99■□□□□ 0.63
TIMP4Q99727 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMP4Q99727 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMP4Q99727 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TIMP4Q99727 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TIMP4Q99727 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TIMP4Q99727 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP4Q99727 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP4Q99727 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP4Q99727 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP4Q99727 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP4Q99727 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP4Q99727 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP4Q99727 CNN2P6-201ENST00000439038 900 ntBASIC18.98■□□□□ 0.63
TIMP4Q99727 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP4Q99727 AC104771.1-201ENST00000603335 964 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms