Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.55■■□□□ 1.52
NEK1Q96PY6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.55■■□□□ 1.52
NEK1Q96PY6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
NEK1Q96PY6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NEK1Q96PY6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
NEK1Q96PY6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.54■■□□□ 1.52
NEK1Q96PY6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NEK1Q96PY6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NEK1Q96PY6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NEK1Q96PY6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
NEK1Q96PY6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NEK1Q96PY6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NEK1Q96PY6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NEK1Q96PY6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NEK1Q96PY6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NEK1Q96PY6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NEK1Q96PY6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NEK1Q96PY6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NEK1Q96PY6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
NEK1Q96PY6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.52■■□□□ 1.52
NEK1Q96PY6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NEK1Q96PY6 RBM17P2-201ENST00000616397 1405 ntBASIC24.52■■□□□ 1.52
NEK1Q96PY6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 MYCNOS-205ENST00000641950 531 ntBASIC24.51■■□□□ 1.51
NEK1Q96PY6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NEK1Q96PY6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.51■■□□□ 1.51
NEK1Q96PY6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 AC243732.1-201ENST00000612648 864 ntBASIC24.5■■□□□ 1.51
NEK1Q96PY6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.5■■□□□ 1.51
NEK1Q96PY6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NEK1Q96PY6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms