Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 AC068473.5-201ENST00000616428 2072 ntBASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3BQ96NU0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 AP000593.1-201ENST00000393668 712 ntBASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 DUSP5P1-201ENST00000441325 1139 ntBASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 AL355355.2-201ENST00000442321 338 ntBASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3BQ96NU0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 AC073508.3-201ENST00000619697 1419 ntBASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 CRYGFP-201ENST00000418459 633 ntBASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3BQ96NU0 KRT8P9-201ENST00000558927 1449 ntBASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 LINC01568-207ENST00000641790 1380 ntBASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 RBM17P2-201ENST00000616397 1405 ntBASIC19.85■□□□□ 0.77
CNTNAP3BQ96NU0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3BQ96NU0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 KRASP1-201ENST00000407852 552 ntBASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 AC053503.5-201ENST00000601508 636 ntBASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 AC006538.3-201ENST00000612495 578 ntBASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 AC105020.6-201ENST00000621523 1217 ntBASIC19.83■□□□□ 0.77
CNTNAP3BQ96NU0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.83■□□□□ 0.76
CNTNAP3BQ96NU0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CNTNAP3BQ96NU0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms