Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 AC097658.1-201ENST00000475555 843 ntBASIC16.87■□□□□ 0.29
ZNF48Q96MX3 AC091874.3-201ENST00000512672 1195 ntBASIC16.87■□□□□ 0.29
ZNF48Q96MX3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.87■□□□□ 0.29
ZNF48Q96MX3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 PRORSD1P-201ENST00000295112 541 ntBASIC16.86■□□□□ 0.29
ZNF48Q96MX3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 KRT18P29-201ENST00000397031 1267 ntBASIC16.86■□□□□ 0.29
ZNF48Q96MX3 DUSP5P2-201ENST00000426873 1033 ntBASIC16.86■□□□□ 0.29
ZNF48Q96MX3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF48Q96MX3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF48Q96MX3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.84■□□□□ 0.29
ZNF48Q96MX3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 AC010542.4-201ENST00000563151 1910 ntBASIC16.84■□□□□ 0.29
ZNF48Q96MX3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF48Q96MX3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.83■□□□□ 0.29
ZNF48Q96MX3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF48Q96MX3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF48Q96MX3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF48Q96MX3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms