Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PHACTR3Q96KR7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.34■■□□□ 1.97
PHACTR3Q96KR7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 SAPCD2P1-201ENST00000395413 1184 ntBASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC27.33■■□□□ 1.97
PHACTR3Q96KR7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
PHACTR3Q96KR7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 CDV3P1-201ENST00000471403 739 ntBASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 MYC-209ENST00000641252 345 ntBASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PHACTR3Q96KR7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 AC007322.3-201ENST00000426526 701 ntBASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 AC083880.1-201ENST00000608266 535 ntBASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC27.31■■□□□ 1.96
PHACTR3Q96KR7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 AL024507.2-201ENST00000606070 2574 ntBASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 CD99P1-205ENST00000527459 561 ntBASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PHACTR3Q96KR7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 MIR4651-201ENST00000582622 73 ntBASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PHACTR3Q96KR7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 CYP2T3P-201ENST00000601990 817 ntBASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 WWC2-AS2-201ENST00000578387 2183 ntBASIC27.28■■□□□ 1.96
PHACTR3Q96KR7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 AC116050.2-201ENST00000612102 1779 ntBASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 ABHD17AP1-201ENST00000358206 933 ntBASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 AC100791.3-201ENST00000617619 330 ntBASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PHACTR3Q96KR7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.96
PHACTR3Q96KR7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
PHACTR3Q96KR7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms