Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ITCHQ96J02 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ITCHQ96J02 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITCHQ96J02 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITCHQ96J02 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITCHQ96J02 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITCHQ96J02 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITCHQ96J02 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITCHQ96J02 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.7■□□□□ 0.74
ITCHQ96J02 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.7■□□□□ 0.74
ITCHQ96J02 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.7■□□□□ 0.74
ITCHQ96J02 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.7■□□□□ 0.74
ITCHQ96J02 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ITCHQ96J02 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.7■□□□□ 0.74
ITCHQ96J02 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
ITCHQ96J02 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITCHQ96J02 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITCHQ96J02 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITCHQ96J02 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.7■□□□□ 0.74
ITCHQ96J02 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.7■□□□□ 0.74
ITCHQ96J02 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITCHQ96J02 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.69■□□□□ 0.74
ITCHQ96J02 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ITCHQ96J02 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
ITCHQ96J02 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITCHQ96J02 AC027702.1-201ENST00000563810 1770 ntBASIC19.68■□□□□ 0.74
ITCHQ96J02 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ITCHQ96J02 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITCHQ96J02 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.68■□□□□ 0.74
ITCHQ96J02 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ITCHQ96J02 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.68■□□□□ 0.74
ITCHQ96J02 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.68■□□□□ 0.74
ITCHQ96J02 PBX2P1-201ENST00000493219 1291 ntBASIC19.68■□□□□ 0.74
ITCHQ96J02 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
ITCHQ96J02 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.68■□□□□ 0.74
ITCHQ96J02 AC131212.1-201ENST00000613771 668 ntBASIC19.68■□□□□ 0.74
ITCHQ96J02 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ITCHQ96J02 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ITCHQ96J02 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ITCHQ96J02 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.68■□□□□ 0.74
ITCHQ96J02 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.68■□□□□ 0.74
ITCHQ96J02 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
ITCHQ96J02 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ITCHQ96J02 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ITCHQ96J02 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 RNF165-205ENST00000588679 2904 ntBASIC19.67■□□□□ 0.74
ITCHQ96J02 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 MIR572-201ENST00000384983 95 ntBASIC19.67■□□□□ 0.74
ITCHQ96J02 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.67■□□□□ 0.74
ITCHQ96J02 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.67■□□□□ 0.74
ITCHQ96J02 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.67■□□□□ 0.74
ITCHQ96J02 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ITCHQ96J02 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ITCHQ96J02 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.67■□□□□ 0.74
ITCHQ96J02 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.67■□□□□ 0.74
ITCHQ96J02 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ITCHQ96J02 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ITCHQ96J02 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ITCHQ96J02 AC020907.5-201ENST00000624372 1936 ntBASIC19.66■□□□□ 0.74
ITCHQ96J02 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
ITCHQ96J02 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ITCHQ96J02 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ITCHQ96J02 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.66■□□□□ 0.74
ITCHQ96J02 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ITCHQ96J02 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.66■□□□□ 0.74
ITCHQ96J02 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.66■□□□□ 0.74
ITCHQ96J02 AC053503.5-201ENST00000601508 636 ntBASIC19.66■□□□□ 0.74
ITCHQ96J02 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ITCHQ96J02 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.66■□□□□ 0.74
ITCHQ96J02 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.66■□□□□ 0.74
ITCHQ96J02 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.66■□□□□ 0.74
ITCHQ96J02 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.66■□□□□ 0.74
ITCHQ96J02 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.66■□□□□ 0.74
ITCHQ96J02 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ITCHQ96J02 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ITCHQ96J02 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms