Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SNRNP40Q96DI7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.71■□□□□ 0.58
SNRNP40Q96DI7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 AC026471.6-201ENST00000622954 1905 ntBASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 CYP21A1P-202ENST00000354927 1481 ntBASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.7■□□□□ 0.58
SNRNP40Q96DI7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP40Q96DI7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 LINC01023-201ENST00000606054 436 ntBASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP40Q96DI7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 AC105020.6-201ENST00000621523 1217 ntBASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms