Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXRED1Q96CU9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 AC027682.1-201ENST00000562846 899 ntBASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 AC142381.2-201ENST00000566120 298 ntBASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 AC005837.3-201ENST00000612163 286 ntBASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 AC007225.1-201ENST00000566331 1836 ntBASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXRED1Q96CU9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXRED1Q96CU9 AC019069.1-201ENST00000610008 1333 ntBASIC17.96■□□□□ 0.46
FOXRED1Q96CU9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
FOXRED1Q96CU9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 AC020907.5-201ENST00000624372 1936 ntBASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXRED1Q96CU9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 AC007952.6-201ENST00000573168 2673 ntBASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 AC003957.1-201ENST00000625108 2673 ntBASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXRED1Q96CU9 AC091305.1-201ENST00000479476 895 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms