Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.46■■□□□ 1.67
SNED1Q8TER0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.46■■□□□ 1.67
SNED1Q8TER0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNED1Q8TER0 MTDHP1-201ENST00000605323 784 ntBASIC25.46■■□□□ 1.67
SNED1Q8TER0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.45■■□□□ 1.67
SNED1Q8TER0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SNED1Q8TER0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.45■■□□□ 1.66
SNED1Q8TER0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 RPS2P55-201ENST00000397318 883 ntBASIC25.45■■□□□ 1.66
SNED1Q8TER0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.45■■□□□ 1.66
SNED1Q8TER0 AC133681.1-201ENST00000465482 601 ntBASIC25.45■■□□□ 1.66
SNED1Q8TER0 AC107956.1-201ENST00000494359 873 ntBASIC25.45■■□□□ 1.66
SNED1Q8TER0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.45■■□□□ 1.66
SNED1Q8TER0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.45■■□□□ 1.66
SNED1Q8TER0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.45■■□□□ 1.66
SNED1Q8TER0 AC124016.1-201ENST00000609552 612 ntBASIC25.45■■□□□ 1.66
SNED1Q8TER0 REXO1L12P-201ENST00000622156 912 ntBASIC25.45■■□□□ 1.66
SNED1Q8TER0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SNED1Q8TER0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
SNED1Q8TER0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.44■■□□□ 1.66
SNED1Q8TER0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SNED1Q8TER0 AC092053.2-201ENST00000640557 1818 ntBASIC25.44■■□□□ 1.66
SNED1Q8TER0 C9orf163-202ENST00000624034 2573 ntBASIC25.44■■□□□ 1.66
SNED1Q8TER0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
SNED1Q8TER0 TSPY7P-201ENST00000431358 1114 ntBASIC25.44■■□□□ 1.66
SNED1Q8TER0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNED1Q8TER0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.44■■□□□ 1.66
SNED1Q8TER0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SNED1Q8TER0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 AC012306.2-201ENST00000609350 630 ntBASIC25.43■■□□□ 1.66
SNED1Q8TER0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
SNED1Q8TER0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNED1Q8TER0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.42■■□□□ 1.66
SNED1Q8TER0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SNED1Q8TER0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
SNED1Q8TER0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.42■■□□□ 1.66
SNED1Q8TER0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SNED1Q8TER0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.42■■□□□ 1.66
SNED1Q8TER0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.42■■□□□ 1.66
SNED1Q8TER0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNED1Q8TER0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.42■■□□□ 1.66
SNED1Q8TER0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.42■■□□□ 1.66
SNED1Q8TER0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNED1Q8TER0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.41■■□□□ 1.66
SNED1Q8TER0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNED1Q8TER0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.41■■□□□ 1.66
SNED1Q8TER0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.41■■□□□ 1.66
SNED1Q8TER0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.41■■□□□ 1.66
SNED1Q8TER0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.41■■□□□ 1.66
SNED1Q8TER0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNED1Q8TER0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNED1Q8TER0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNED1Q8TER0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNED1Q8TER0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SNED1Q8TER0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SNED1Q8TER0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.4■■□□□ 1.66
SNED1Q8TER0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SNED1Q8TER0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.4■■□□□ 1.66
SNED1Q8TER0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.39■■□□□ 1.66
SNED1Q8TER0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SNED1Q8TER0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SNED1Q8TER0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.39■■□□□ 1.66
SNED1Q8TER0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.39■■□□□ 1.66
SNED1Q8TER0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms