Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 AC068338.2-201ENST00000563278 1430 ntBASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 AL024507.2-201ENST00000606070 2574 ntBASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 GPX1P1-201ENST00000388829 606 ntBASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 AC104771.1-201ENST00000603335 964 ntBASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 AL109923.1-201ENST00000618799 583 ntBASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FNDC9Q8TBE3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FNDC9Q8TBE3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 AC245052.3-201ENST00000450182 901 ntBASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 AL121832.2-201ENST00000610979 668 ntBASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 AC243732.1-201ENST00000612648 864 ntBASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FNDC9Q8TBE3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 AC083906.2-201ENST00000511578 360 ntBASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FNDC9Q8TBE3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC9Q8TBE3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms