Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 BMP1-204ENST00000397814 836 ntTSL 4 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 AL355472.2-201ENST00000422958 438 ntBASIC6.36□□□□□ -1.39
SYNE1Q8NF91 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 AL162412.1-201ENST00000567129 965 ntBASIC6.36□□□□□ -1.39
SYNE1Q8NF91 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 AC073648.6-201ENST00000641589 218 ntBASIC6.36□□□□□ -1.39
SYNE1Q8NF91 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE1Q8NF91 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 KRT17P1-201ENST00000399211 1546 ntBASIC6.35□□□□□ -1.39
SYNE1Q8NF91 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 KRT18P29-201ENST00000397031 1267 ntBASIC6.35□□□□□ -1.39
SYNE1Q8NF91 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 AC026471.6-201ENST00000622954 1905 ntBASIC6.35□□□□□ -1.39
SYNE1Q8NF91 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 NFE2L3P1-201ENST00000588207 1959 ntBASIC6.35□□□□□ -1.39
SYNE1Q8NF91 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 GALC-202ENST00000393568 2054 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 KRT16P2-201ENST00000414673 1423 ntBASIC6.35□□□□□ -1.39
SYNE1Q8NF91 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 UNC93B4-201ENST00000505679 747 ntBASIC6.35□□□□□ -1.39
SYNE1Q8NF91 AC016405.3-201ENST00000607710 860 ntBASIC6.35□□□□□ -1.39
SYNE1Q8NF91 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SYNE1Q8NF91 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE1Q8NF91 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms