Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 RARRES2P11-201ENST00000635158 484 ntBASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SRFBP1Q8NEF9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SRFBP1Q8NEF9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.75
SRFBP1Q8NEF9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRFBP1Q8NEF9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 AL137060.1-201ENST00000618151 2648 ntBASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 SLC25A24-204ENST00000569674 2357 ntBASIC19.75■□□□□ 0.75
SRFBP1Q8NEF9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 RBM17P2-201ENST00000616397 1405 ntBASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRFBP1Q8NEF9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 AC121338.2-201ENST00000622535 1744 ntBASIC19.73■□□□□ 0.75
SRFBP1Q8NEF9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFBP1Q8NEF9 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.71■□□□□ 0.75
SRFBP1Q8NEF9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
SRFBP1Q8NEF9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRFBP1Q8NEF9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.71■□□□□ 0.75
SRFBP1Q8NEF9 AC006015.1-201ENST00000429970 570 ntBASIC19.71■□□□□ 0.75
SRFBP1Q8NEF9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRFBP1Q8NEF9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms