Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
CDRT4Q8N9R6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDRT4Q8N9R6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.26■□□□□ 0.67
CDRT4Q8N9R6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDRT4Q8N9R6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 AC243732.1-201ENST00000612648 864 ntBASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT4Q8N9R6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 UBE2DNL-204ENST00000602536 740 ntBASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT4Q8N9R6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 KRT18P5-201ENST00000436075 1291 ntBASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 MYCNOS-205ENST00000641950 531 ntBASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 RBM17P2-201ENST00000616397 1405 ntBASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT4Q8N9R6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 MIR5787-201ENST00000611784 55 ntBASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT4Q8N9R6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDRT4Q8N9R6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDRT4Q8N9R6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms