Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCML4Q8N228 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SCML4Q8N228 AF201337.1-201ENST00000520239 748 ntBASIC21.65■■□□□ 1.06
SCML4Q8N228 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.65■■□□□ 1.06
SCML4Q8N228 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.65■■□□□ 1.06
SCML4Q8N228 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SCML4Q8N228 AC008694.1-202ENST00000636953 945 ntBASIC21.65■■□□□ 1.06
SCML4Q8N228 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.65■■□□□ 1.06
SCML4Q8N228 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.65■■□□□ 1.06
SCML4Q8N228 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCML4Q8N228 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.65■■□□□ 1.06
SCML4Q8N228 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCML4Q8N228 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SCML4Q8N228 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SCML4Q8N228 AC083906.2-201ENST00000511578 360 ntBASIC21.64■■□□□ 1.05
SCML4Q8N228 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCML4Q8N228 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.64■■□□□ 1.05
SCML4Q8N228 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.64■■□□□ 1.05
SCML4Q8N228 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.64■■□□□ 1.05
SCML4Q8N228 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
SCML4Q8N228 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.64■■□□□ 1.05
SCML4Q8N228 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCML4Q8N228 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
SCML4Q8N228 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCML4Q8N228 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML4Q8N228 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCML4Q8N228 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML4Q8N228 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCML4Q8N228 GPX1P1-201ENST00000388829 606 ntBASIC21.63■■□□□ 1.05
SCML4Q8N228 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.63■■□□□ 1.05
SCML4Q8N228 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.63■■□□□ 1.05
SCML4Q8N228 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCML4Q8N228 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
SCML4Q8N228 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SCML4Q8N228 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML4Q8N228 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCML4Q8N228 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML4Q8N228 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
SCML4Q8N228 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.62■■□□□ 1.05
SCML4Q8N228 GUSBP6-202ENST00000438529 1198 ntBASIC21.62■■□□□ 1.05
SCML4Q8N228 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.62■■□□□ 1.05
SCML4Q8N228 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.62■■□□□ 1.05
SCML4Q8N228 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.62■■□□□ 1.05
SCML4Q8N228 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.62■■□□□ 1.05
SCML4Q8N228 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.62■■□□□ 1.05
SCML4Q8N228 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCML4Q8N228 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.62■■□□□ 1.05
SCML4Q8N228 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SCML4Q8N228 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SCML4Q8N228 ID1-201ENST00000376105 1233 ntBASIC21.61■■□□□ 1.05
SCML4Q8N228 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.61■■□□□ 1.05
SCML4Q8N228 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SCML4Q8N228 TSPY6P-201ENST00000448518 926 ntBASIC21.61■■□□□ 1.05
SCML4Q8N228 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.61■■□□□ 1.05
SCML4Q8N228 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.61■■□□□ 1.05
SCML4Q8N228 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.61■■□□□ 1.05
SCML4Q8N228 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SCML4Q8N228 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCML4Q8N228 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.6■■□□□ 1.05
SCML4Q8N228 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SCML4Q8N228 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SCML4Q8N228 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 AC105036.2-201ENST00000569468 176 ntBASIC21.6■■□□□ 1.05
SCML4Q8N228 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 AC010980.2-201ENST00000587099 1412 ntBASIC21.6■■□□□ 1.05
SCML4Q8N228 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.6■■□□□ 1.05
SCML4Q8N228 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML4Q8N228 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.59■■□□□ 1.05
SCML4Q8N228 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SCML4Q8N228 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
SCML4Q8N228 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 AC093787.1-201ENST00000450396 207 ntBASIC21.59■■□□□ 1.05
SCML4Q8N228 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SCML4Q8N228 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.59■■□□□ 1.05
SCML4Q8N228 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCML4Q8N228 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms