Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SYCE1Q8N0S2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.1
SYCE1Q8N0S2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.89■■□□□ 1.1
SYCE1Q8N0S2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SYCE1Q8N0S2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SYCE1Q8N0S2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SYCE1Q8N0S2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.89■■□□□ 1.1
SYCE1Q8N0S2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 AC099791.1-201ENST00000416440 715 ntBASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYCE1Q8N0S2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 AC053503.5-201ENST00000601508 636 ntBASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 FP700111.2-201ENST00000619190 1892 ntBASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.88■■□□□ 1.09
SYCE1Q8N0S2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 AC011484.1-201ENST00000377652 1995 ntBASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 AL121603.2-201ENST00000557373 2117 ntBASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 EEF1DP3-203ENST00000566025 782 ntBASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SYCE1Q8N0S2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 AP004607.4-201ENST00000530158 1459 ntBASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.86■■□□□ 1.09
SYCE1Q8N0S2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 MIR572-201ENST00000384983 95 ntBASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYCE1Q8N0S2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYCE1Q8N0S2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.83■■□□□ 1.09
SYCE1Q8N0S2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYCE1Q8N0S2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms