Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 FAM21FP-204ENST00000608637 956 ntBASIC14.55□□□□□ -0.08
CSMD3Q7Z407 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 AC120498.10-201ENST00000621827 505 ntBASIC14.55□□□□□ -0.08
CSMD3Q7Z407 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 AL023875.1-201ENST00000640777 796 ntBASIC14.55□□□□□ -0.08
CSMD3Q7Z407 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD3Q7Z407 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 AC010542.4-201ENST00000563151 1910 ntBASIC14.54□□□□□ -0.08
CSMD3Q7Z407 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD3Q7Z407 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 AC092053.2-201ENST00000640557 1818 ntBASIC14.53□□□□□ -0.08
CSMD3Q7Z407 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD3Q7Z407 AP003071.4-201ENST00000562276 1284 ntBASIC14.53□□□□□ -0.08
CSMD3Q7Z407 KRT17P2-201ENST00000300992 1314 ntBASIC14.53□□□□□ -0.08
CSMD3Q7Z407 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 C9orf163-202ENST00000624034 2573 ntBASIC14.52□□□□□ -0.08
CSMD3Q7Z407 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.52□□□□□ -0.08
CSMD3Q7Z407 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.52□□□□□ -0.09
CSMD3Q7Z407 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms