Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.39■□□□□ 0.69
RTL4Q6ZR62 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL4Q6ZR62 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL4Q6ZR62 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RTL4Q6ZR62 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL4Q6ZR62 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL4Q6ZR62 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.39■□□□□ 0.69
RTL4Q6ZR62 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTL4Q6ZR62 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 SLC7A5P1-201ENST00000568957 537 ntBASIC19.37■□□□□ 0.69
RTL4Q6ZR62 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 RAP2CP1-201ENST00000605103 478 ntBASIC19.37■□□□□ 0.69
RTL4Q6ZR62 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTL4Q6ZR62 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL4Q6ZR62 AC005229.4-201ENST00000610085 2198 ntBASIC19.36■□□□□ 0.69
RTL4Q6ZR62 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 SLC7A5P2-201ENST00000553010 536 ntBASIC19.35■□□□□ 0.69
RTL4Q6ZR62 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 AC231657.2-201ENST00000624556 255 ntBASIC19.35■□□□□ 0.69
RTL4Q6ZR62 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 AC026471.6-201ENST00000622954 1905 ntBASIC19.35■□□□□ 0.69
RTL4Q6ZR62 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.35■□□□□ 0.69
RTL4Q6ZR62 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 DUX4L16-201ENST00000555130 1264 ntBASIC19.34■□□□□ 0.69
RTL4Q6ZR62 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 AC010536.3-201ENST00000620306 533 ntBASIC19.34■□□□□ 0.69
RTL4Q6ZR62 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms