Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 SLC25A24-204ENST00000569674 2357 ntBASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 CCDC92B-201ENST00000575506 885 ntBASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 FEM1AP1-201ENST00000431297 1995 ntBASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 AC006128.1-201ENST00000624704 1661 ntBASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FAM53AQ6NSI3 LINC02228-203ENST00000641970 1355 ntBASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 KRT18P61-201ENST00000585825 1298 ntBASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 AC121338.2-201ENST00000622535 1744 ntBASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FAM53AQ6NSI3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 AL391422.3-201ENST00000603791 2761 ntBASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 TERF1P2-201ENST00000583350 1212 ntBASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 AC104187.1-201ENST00000607510 612 ntBASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FAM53AQ6NSI3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 AC073314.1-201ENST00000568729 2216 ntBASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 SLC7A5P2-201ENST00000553010 536 ntBASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM53AQ6NSI3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms