Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 AC007322.3-201ENST00000426526 701 ntBASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 AC005363.2-201ENST00000618631 242 ntBASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PTCRAQ6ISU1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 AC092068.2-201ENST00000590491 1708 ntBASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCRAQ6ISU1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 CYP21A1P-202ENST00000354927 1481 ntBASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 MIR6786-201ENST00000616843 113 ntBASIC21.58■■□□□ 1.05
PTCRAQ6ISU1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.58■■□□□ 1.04
PTCRAQ6ISU1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PTCRAQ6ISU1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PTCRAQ6ISU1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 AL355355.2-201ENST00000442321 338 ntBASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTCRAQ6ISU1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 AC145285.6-201ENST00000604632 637 ntBASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
PTCRAQ6ISU1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 AC005521.1-201ENST00000393351 872 ntBASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PTCRAQ6ISU1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 AC006557.6-201ENST00000623071 864 ntBASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 AC137767.1-201ENST00000602918 1920 ntBASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.54■■□□□ 1.04
PTCRAQ6ISU1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCRAQ6ISU1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms