Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.02■□□□□ 0.8
DEPDC1Q5TB30 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DEPDC1Q5TB30 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DEPDC1Q5TB30 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 AL049796.1-201ENST00000565336 1766 ntBASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEPDC1Q5TB30 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 AC061975.6-201ENST00000579045 1553 ntBASIC20■□□□□ 0.79
DEPDC1Q5TB30 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DEPDC1Q5TB30 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20■□□□□ 0.79
DEPDC1Q5TB30 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
DEPDC1Q5TB30 COX20-201ENST00000366528 568 ntTSL 2 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 POU5F1P4-201ENST00000413175 1085 ntBASIC20■□□□□ 0.79
DEPDC1Q5TB30 AC097381.1-201ENST00000429019 1296 ntBASIC20■□□□□ 0.79
DEPDC1Q5TB30 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 AC008175.2-201ENST00000612840 297 ntBASIC20■□□□□ 0.79
DEPDC1Q5TB30 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20■□□□□ 0.79
DEPDC1Q5TB30 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DEPDC1Q5TB30 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DEPDC1Q5TB30 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DEPDC1Q5TB30 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 AC104187.1-201ENST00000607510 612 ntBASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 AC019069.1-201ENST00000610008 1333 ntBASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 AP004607.4-201ENST00000530158 1459 ntBASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC1Q5TB30 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4L2-201ENST00000561772 1275 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 MIR6821-201ENST00000617625 74 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4L6-201ENST00000626483 1275 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4L1-201ENST00000627662 1275 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4L8-201ENST00000629013 1275 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4L3-201ENST00000630187 1275 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4L7-201ENST00000630678 1275 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 DUX4L5-201ENST00000630834 1275 ntBASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.98■□□□□ 0.79
DEPDC1Q5TB30 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC1Q5TB30 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DEPDC1Q5TB30 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC1Q5TB30 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC1Q5TB30 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms