Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 C11orf96-202ENST00000528572 1834 ntBASIC22.93■■□□□ 1.26
TRIM60Q495X7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM60Q495X7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM60Q495X7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 AC133681.1-201ENST00000465482 601 ntBASIC22.92■■□□□ 1.26
TRIM60Q495X7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM60Q495X7 AP001412.1-201ENST00000608405 714 ntBASIC22.92■■□□□ 1.26
TRIM60Q495X7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM60Q495X7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM60Q495X7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM60Q495X7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM60Q495X7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.92■■□□□ 1.26
TRIM60Q495X7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 AC239809.2-201ENST00000415381 517 ntBASIC22.91■■□□□ 1.26
TRIM60Q495X7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 AC113410.3-201ENST00000623366 203 ntBASIC22.91■■□□□ 1.26
TRIM60Q495X7 AC097493.4-201ENST00000641197 219 ntBASIC22.91■■□□□ 1.26
TRIM60Q495X7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
TRIM60Q495X7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM60Q495X7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM60Q495X7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM60Q495X7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM60Q495X7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM60Q495X7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM60Q495X7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM60Q495X7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM60Q495X7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM60Q495X7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM60Q495X7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.89■■□□□ 1.26
TRIM60Q495X7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM60Q495X7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.26
TRIM60Q495X7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM60Q495X7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.89■■□□□ 1.26
TRIM60Q495X7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM60Q495X7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM60Q495X7 AC012306.2-201ENST00000609350 630 ntBASIC22.89■■□□□ 1.25
TRIM60Q495X7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM60Q495X7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM60Q495X7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.89■■□□□ 1.25
TRIM60Q495X7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM60Q495X7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM60Q495X7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM60Q495X7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRIM60Q495X7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.88■■□□□ 1.25
TRIM60Q495X7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM60Q495X7 AL355075.4-201ENST00000554988 638 ntBASIC22.88■■□□□ 1.25
TRIM60Q495X7 AL445228.2-201ENST00000605589 952 ntBASIC22.88■■□□□ 1.25
TRIM60Q495X7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM60Q495X7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM60Q495X7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM60Q495X7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
TRIM60Q495X7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM60Q495X7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM60Q495X7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM60Q495X7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM60Q495X7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM60Q495X7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms