Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST3H3Q16695 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST3H3Q16695 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HIST3H3Q16695 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H3Q16695 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
HIST3H3Q16695 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H3Q16695 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST3H3Q16695 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIST3H3Q16695 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H3Q16695 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIST3H3Q16695 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H3Q16695 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
HIST3H3Q16695 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 AC091799.1-201ENST00000422823 811 ntBASIC18.29■□□□□ 0.52
HIST3H3Q16695 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST3H3Q16695 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H3Q16695 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 AC116050.2-201ENST00000612102 1779 ntBASIC18.28■□□□□ 0.52
HIST3H3Q16695 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 MIR5787-201ENST00000611784 55 ntBASIC18.28■□□□□ 0.52
HIST3H3Q16695 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H3Q16695 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST3H3Q16695 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 KRT18P11-201ENST00000435214 1283 ntBASIC18.27■□□□□ 0.52
HIST3H3Q16695 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.27■□□□□ 0.52
HIST3H3Q16695 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HIST3H3Q16695 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H3Q16695 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms