Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 TCD1YHR003C 1290 nt2.12□□□□□ -2.07
SMD1Q02260 YIL012WYIL012W 342 nt2.12□□□□□ -2.07
SMD1Q02260 YIL175WYIL175W 318 nt2.12□□□□□ -2.07
SMD1Q02260 YJL222W-BYJL222W-B 138 nt2.12□□□□□ -2.07
SMD1Q02260 SFT1YKL006C-A 294 nt2.12□□□□□ -2.07
SMD1Q02260 SDH3YKL141W 597 nt2.12□□□□□ -2.07
SMD1Q02260 ECM9YKR004C 1134 nt2.12□□□□□ -2.07
SMD1Q02260 ATG38YLR211C 681 nt2.12□□□□□ -2.07
SMD1Q02260 VPS63YLR261C 327 nt2.12□□□□□ -2.07
SMD1Q02260 YOL029CYOL029C 606 nt2.12□□□□□ -2.07
SMD1Q02260 YPR014CYPR014C 330 nt2.12□□□□□ -2.07
SMD1Q02260 PIS1YPR113W 663 nt2.12□□□□□ -2.07
SMD1Q02260 YPR170CYPR170C 336 nt2.12□□□□□ -2.07
SMD1Q02260 MUD1YBR119W 897 nt2.12□□□□□ -2.07
SMD1Q02260 YEL1YBL060W 2064 nt2.12□□□□□ -2.07
SMD1Q02260 TFB1YDR311W 1929 nt2.12□□□□□ -2.07
SMD1Q02260 RGC1YPR115W 3252 nt2.12□□□□□ -2.07
SMD1Q02260 BNR1YIL159W 4128 nt2.12□□□□□ -2.07
SMD1Q02260 PMR1YGL167C 2853 nt2.11□□□□□ -2.07
SMD1Q02260 YDR018CYDR018C 1191 nt2.11□□□□□ -2.07
SMD1Q02260 PNC1YGL037C 651 nt2.11□□□□□ -2.07
SMD1Q02260 COX23YHR116W 456 nt2.11□□□□□ -2.07
SMD1Q02260 YIL054WYIL054W 318 nt2.11□□□□□ -2.07
SMD1Q02260 YJL119CYJL119C 324 nt2.11□□□□□ -2.07
SMD1Q02260 SRP21YKL122C 504 nt2.11□□□□□ -2.07
SMD1Q02260 PDS5YMR076C 3834 nt2.11□□□□□ -2.07
SMD1Q02260 INP1YMR204C 1263 nt2.11□□□□□ -2.07
SMD1Q02260 GIM3YNL153C 390 nt2.11□□□□□ -2.07
SMD1Q02260 SGT1YOR057W 1188 nt2.11□□□□□ -2.07
SMD1Q02260 snR42snR42 351 nt2.11□□□□□ -2.07
SMD1Q02260 FAA2YER015W 2235 nt2.11□□□□□ -2.07
SMD1Q02260 CHO2YGR157W 2610 nt2.11□□□□□ -2.07
SMD1Q02260 ALY1YKR021W 2748 nt2.1□□□□□ -2.07
SMD1Q02260 NCS2YNL119W 1482 nt2.1□□□□□ -2.07
SMD1Q02260 snR9snR9 187 nt2.1□□□□□ -2.07
SMD1Q02260 PRP38YGR075C 729 nt2.1□□□□□ -2.07
SMD1Q02260 YIL169CYIL169C 2988 nt2.1□□□□□ -2.07
SMD1Q02260 IRC21YMR073C 606 nt2.1□□□□□ -2.07
SMD1Q02260 MRPL16YBL038W 699 nt2.1□□□□□ -2.07
SMD1Q02260 MRPL33YMR286W 261 nt2.1□□□□□ -2.07
SMD1Q02260 RRT16YNL105W 429 nt2.1□□□□□ -2.07
SMD1Q02260 YPR153WYPR153W 423 nt2.1□□□□□ -2.07
SMD1Q02260 CEP3YMR168C 1827 nt2.1□□□□□ -2.07
SMD1Q02260 NMA111YNL123W 2994 nt2.1□□□□□ -2.07
SMD1Q02260 SCY1YGL083W 2415 nt2.09□□□□□ -2.07
SMD1Q02260 SSP1YHR184W 1716 nt2.09□□□□□ -2.07
SMD1Q02260 NTO1YPR031W 2247 nt2.09□□□□□ -2.07
SMD1Q02260 PBS2YJL128C 2007 nt2.09□□□□□ -2.07
SMD1Q02260 DTD1YDL219W 453 nt2.09□□□□□ -2.07
SMD1Q02260 DAD1YDR016C 285 nt2.09□□□□□ -2.07
SMD1Q02260 NCB2YDR397C 441 nt2.09□□□□□ -2.07
SMD1Q02260 YDR461C-AYDR461C-A 243 nt2.09□□□□□ -2.07
SMD1Q02260 YJR087WYJR087W 351 nt2.09□□□□□ -2.07
SMD1Q02260 YLR271WYLR271W 825 nt2.09□□□□□ -2.07
SMD1Q02260 COX8YLR395C 237 nt2.09□□□□□ -2.07
SMD1Q02260 PDP3YLR455W 915 nt2.09□□□□□ -2.07
SMD1Q02260 MPP6YNR024W 561 nt2.09□□□□□ -2.07
SMD1Q02260 LCL1YPL056C 306 nt2.09□□□□□ -2.07
SMD1Q02260 CSM4YPL200W 471 nt2.09□□□□□ -2.07
SMD1Q02260 UBP14YBR058C 2346 nt2.09□□□□□ -2.07
SMD1Q02260 YBT1YLL048C 4986 nt2.09□□□□□ -2.08
SMD1Q02260 SNT1YCR033W 3681 nt2.09□□□□□ -2.08
SMD1Q02260 RPN3YER021W 1572 nt2.09□□□□□ -2.08
SMD1Q02260 YLR446WYLR446W 1302 nt2.09□□□□□ -2.08
SMD1Q02260 YKL075CYKL075C 1353 nt2.09□□□□□ -2.08
SMD1Q02260 KAR9YPL269W 1935 nt2.09□□□□□ -2.08
SMD1Q02260 ISW1YBR245C 3390 nt2.09□□□□□ -2.08
SMD1Q02260 CTF13YMR094W 1437 nt2.08□□□□□ -2.08
SMD1Q02260 RGR1YLR071C 3249 nt2.08□□□□□ -2.08
SMD1Q02260 HFD1YMR110C 1599 nt2.08□□□□□ -2.08
SMD1Q02260 OPI6YDL096C 327 nt2.08□□□□□ -2.08
SMD1Q02260 HYP2YEL034W 474 nt2.08□□□□□ -2.08
SMD1Q02260 TMA20YER007C-A 546 nt2.08□□□□□ -2.08
SMD1Q02260 YGR109W-AYGR109W-A 873 nt2.08□□□□□ -2.08
SMD1Q02260 YHR054CYHR054C 1065 nt2.08□□□□□ -2.08
SMD1Q02260 YIL082WYIL082W 873 nt2.08□□□□□ -2.08
SMD1Q02260 SDL1YIL167W 633 nt2.08□□□□□ -2.08
SMD1Q02260 YAP5YIR018W 738 nt2.08□□□□□ -2.08
SMD1Q02260 AIM26YKL037W 357 nt2.08□□□□□ -2.08
SMD1Q02260 RPL8BYLL045C 771 nt2.08□□□□□ -2.08
SMD1Q02260 MSN1YOL116W 1149 nt2.08□□□□□ -2.08
SMD1Q02260 TPK2YPL203W 1143 nt2.08□□□□□ -2.08
SMD1Q02260 ACM1YPL267W 630 nt2.08□□□□□ -2.08
SMD1Q02260 MFB1YDR219C 1398 nt2.08□□□□□ -2.08
SMD1Q02260 MET10YFR030W 3108 nt2.07□□□□□ -2.08
SMD1Q02260 ESL1YIL151C 3357 nt2.07□□□□□ -2.08
SMD1Q02260 FAR7YFR008W 666 nt2.07□□□□□ -2.08
SMD1Q02260 MTM1YGR257C 1101 nt2.07□□□□□ -2.08
SMD1Q02260 YHL005CYHL005C 393 nt2.07□□□□□ -2.08
SMD1Q02260 CKA1YIL035C 1119 nt2.07□□□□□ -2.08
SMD1Q02260 YIR036W-AYIR036W-A 402 nt2.07□□□□□ -2.08
SMD1Q02260 YAL037WYAL037W 804 nt2.07□□□□□ -2.08
SMD1Q02260 SDO1YLR022C 753 nt2.07□□□□□ -2.08
SMD1Q02260 YLR224WYLR224W 1110 nt2.07□□□□□ -2.08
SMD1Q02260 YAP7YOL028C 738 nt2.07□□□□□ -2.08
SMD1Q02260 YOL085W-AYOL085W-A 213 nt2.07□□□□□ -2.08
SMD1Q02260 VHR1YIL056W 1923 nt2.07□□□□□ -2.08
SMD1Q02260 ERG11YHR007C 1593 nt2.06□□□□□ -2.08
SMD1Q02260 SGM1YJR134C 2124 nt2.06□□□□□ -2.08
SMD1Q02260 snR59snR59 78 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms