Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBA52P62987 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBA52P62987 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBA52P62987 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.78■□□□□ 0.44
UBA52P62987 FP325331.1-202ENST00000623531 1380 ntBASIC17.78■□□□□ 0.44
UBA52P62987 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UBA52P62987 AL353803.4-201ENST00000565882 1934 ntBASIC17.77■□□□□ 0.44
UBA52P62987 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.77■□□□□ 0.44
UBA52P62987 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.77■□□□□ 0.44
UBA52P62987 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 AP005435.1-201ENST00000529293 1178 ntBASIC17.77■□□□□ 0.44
UBA52P62987 DUX4L4-201ENST00000566884 1269 ntBASIC17.77■□□□□ 0.44
UBA52P62987 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UBA52P62987 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.77■□□□□ 0.44
UBA52P62987 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
UBA52P62987 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.77■□□□□ 0.44
UBA52P62987 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UBA52P62987 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBA52P62987 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UBA52P62987 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBA52P62987 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBA52P62987 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBA52P62987 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBA52P62987 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBA52P62987 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBA52P62987 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.76■□□□□ 0.43
UBA52P62987 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBA52P62987 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.76■□□□□ 0.43
UBA52P62987 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.76■□□□□ 0.43
UBA52P62987 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.76■□□□□ 0.43
UBA52P62987 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.76■□□□□ 0.43
UBA52P62987 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.76■□□□□ 0.43
UBA52P62987 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBA52P62987 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.76■□□□□ 0.43
UBA52P62987 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.76■□□□□ 0.43
UBA52P62987 AC105233.4-201ENST00000642045 216 ntBASIC17.76■□□□□ 0.43
UBA52P62987 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.76■□□□□ 0.43
UBA52P62987 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBA52P62987 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBA52P62987 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBA52P62987 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBA52P62987 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
UBA52P62987 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
UBA52P62987 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.75■□□□□ 0.43
UBA52P62987 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBA52P62987 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
UBA52P62987 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBA52P62987 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.75■□□□□ 0.43
UBA52P62987 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBA52P62987 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBA52P62987 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBA52P62987 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBA52P62987 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBA52P62987 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBA52P62987 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.75■□□□□ 0.43
UBA52P62987 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
UBA52P62987 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBA52P62987 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBA52P62987 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBA52P62987 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.75■□□□□ 0.43
UBA52P62987 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.75■□□□□ 0.43
UBA52P62987 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBA52P62987 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.74■□□□□ 0.43
UBA52P62987 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.74■□□□□ 0.43
UBA52P62987 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.74■□□□□ 0.43
UBA52P62987 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.74■□□□□ 0.43
UBA52P62987 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBA52P62987 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.74■□□□□ 0.43
UBA52P62987 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.74■□□□□ 0.43
UBA52P62987 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.74■□□□□ 0.43
UBA52P62987 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.74■□□□□ 0.43
UBA52P62987 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBA52P62987 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBA52P62987 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.74■□□□□ 0.43
UBA52P62987 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA52P62987 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA52P62987 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA52P62987 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBA52P62987 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms