Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
AP3S2P59780 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
AP3S2P59780 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.78■□□□□ 0.44
AP3S2P59780 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.78■□□□□ 0.44
AP3S2P59780 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 DUX4L18-201ENST00000553347 1267 ntBASIC17.78■□□□□ 0.44
AP3S2P59780 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3S2P59780 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
AP3S2P59780 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3S2P59780 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.77■□□□□ 0.44
AP3S2P59780 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.77■□□□□ 0.44
AP3S2P59780 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 AC112907.3-201ENST00000577781 2400 ntBASIC17.77■□□□□ 0.44
AP3S2P59780 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.77■□□□□ 0.44
AP3S2P59780 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
AP3S2P59780 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3S2P59780 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3S2P59780 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3S2P59780 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
AP3S2P59780 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.77■□□□□ 0.43
AP3S2P59780 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3S2P59780 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3S2P59780 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
AP3S2P59780 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
AP3S2P59780 AL512408.1-201ENST00000569378 2000 ntBASIC17.76■□□□□ 0.43
AP3S2P59780 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.76■□□□□ 0.43
AP3S2P59780 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3S2P59780 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
AP3S2P59780 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AP3S2P59780 AC099778.1-201ENST00000568593 1911 ntBASIC17.75■□□□□ 0.43
AP3S2P59780 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AP3S2P59780 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.75■□□□□ 0.43
AP3S2P59780 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.75■□□□□ 0.43
AP3S2P59780 AC137630.3-201ENST00000607245 391 ntBASIC17.75■□□□□ 0.43
AP3S2P59780 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3S2P59780 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AP3S2P59780 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3S2P59780 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
AP3S2P59780 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
AP3S2P59780 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3S2P59780 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.74■□□□□ 0.43
AP3S2P59780 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3S2P59780 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms