Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN8P56748 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN8P56748 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLDN8P56748 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN8P56748 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 AC008175.2-201ENST00000612840 297 ntBASIC19.72■□□□□ 0.75
CLDN8P56748 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN8P56748 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
CLDN8P56748 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN8P56748 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN8P56748 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CLDN8P56748 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN8P56748 FP700111.2-201ENST00000619190 1892 ntBASIC19.71■□□□□ 0.75
CLDN8P56748 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN8P56748 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN8P56748 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN8P56748 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN8P56748 AL139246.5-201ENST00000606645 996 ntBASIC19.71■□□□□ 0.75
CLDN8P56748 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN8P56748 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN8P56748 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN8P56748 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLDN8P56748 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN8P56748 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN8P56748 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN8P56748 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN8P56748 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN8P56748 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLDN8P56748 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN8P56748 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN8P56748 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN8P56748 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN8P56748 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLDN8P56748 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN8P56748 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN8P56748 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 KRT87P-202ENST00000534226 1464 ntBASIC19.69■□□□□ 0.74
CLDN8P56748 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLDN8P56748 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 AC079140.4-201ENST00000507448 529 ntBASIC19.69■□□□□ 0.74
CLDN8P56748 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN8P56748 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN8P56748 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN8P56748 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN8P56748 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLDN8P56748 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN8P56748 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN8P56748 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLDN8P56748 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CLDN8P56748 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN8P56748 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CLDN8P56748 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN8P56748 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN8P56748 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN8P56748 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN8P56748 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN8P56748 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN8P56748 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN8P56748 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN8P56748 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN8P56748 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN8P56748 AC142381.2-201ENST00000566120 298 ntBASIC19.67■□□□□ 0.74
CLDN8P56748 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms