Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PEX3P56589 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
PEX3P56589 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PEX3P56589 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PEX3P56589 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.88■■□□□ 1.25
PEX3P56589 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.88■■□□□ 1.25
PEX3P56589 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.88■■□□□ 1.25
PEX3P56589 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.88■■□□□ 1.25
PEX3P56589 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PEX3P56589 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PEX3P56589 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.87■■□□□ 1.25
PEX3P56589 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.87■■□□□ 1.25
PEX3P56589 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PEX3P56589 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 CYP2T1P-201ENST00000432607 1285 ntBASIC22.87■■□□□ 1.25
PEX3P56589 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.87■■□□□ 1.25
PEX3P56589 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.87■■□□□ 1.25
PEX3P56589 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PEX3P56589 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.87■■□□□ 1.25
PEX3P56589 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PEX3P56589 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.87■■□□□ 1.25
PEX3P56589 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PEX3P56589 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.87■■□□□ 1.25
PEX3P56589 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.86■■□□□ 1.25
PEX3P56589 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PEX3P56589 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
PEX3P56589 AC016405.3-201ENST00000607710 860 ntBASIC22.86■■□□□ 1.25
PEX3P56589 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.86■■□□□ 1.25
PEX3P56589 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.86■■□□□ 1.25
PEX3P56589 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PEX3P56589 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.86■■□□□ 1.25
PEX3P56589 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PEX3P56589 AC005229.4-201ENST00000610085 2198 ntBASIC22.86■■□□□ 1.25
PEX3P56589 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.85■■□□□ 1.25
PEX3P56589 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PEX3P56589 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PEX3P56589 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PEX3P56589 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PEX3P56589 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
PEX3P56589 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.85■■□□□ 1.25
PEX3P56589 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.85■■□□□ 1.25
PEX3P56589 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
PEX3P56589 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.85■■□□□ 1.25
PEX3P56589 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
PEX3P56589 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
PEX3P56589 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PEX3P56589 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PEX3P56589 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.84■■□□□ 1.25
PEX3P56589 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.84■■□□□ 1.25
PEX3P56589 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.84■■□□□ 1.25
PEX3P56589 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.84■■□□□ 1.25
PEX3P56589 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PEX3P56589 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.83■■□□□ 1.25
PEX3P56589 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PEX3P56589 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PEX3P56589 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PEX3P56589 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PEX3P56589 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PEX3P56589 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PEX3P56589 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.83■■□□□ 1.25
PEX3P56589 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.83■■□□□ 1.25
PEX3P56589 CDV3P1-201ENST00000471403 739 ntBASIC22.83■■□□□ 1.25
PEX3P56589 AL162412.1-201ENST00000567129 965 ntBASIC22.83■■□□□ 1.25
PEX3P56589 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PEX3P56589 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.83■■□□□ 1.25
PEX3P56589 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.83■■□□□ 1.25
PEX3P56589 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.83■■□□□ 1.25
PEX3P56589 AC116050.2-201ENST00000612102 1779 ntBASIC22.83■■□□□ 1.24
PEX3P56589 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.83■■□□□ 1.24
PEX3P56589 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.82■■□□□ 1.24
PEX3P56589 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms