Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN1P54253 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN1P54253 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ATXN1P54253 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ATXN1P54253 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN1P54253 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ATXN1P54253 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
ATXN1P54253 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.76■■□□□ 1.07
ATXN1P54253 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.76■■□□□ 1.07
ATXN1P54253 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN1P54253 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATXN1P54253 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN1P54253 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATXN1P54253 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.75■■□□□ 1.07
ATXN1P54253 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.75■■□□□ 1.07
ATXN1P54253 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.75■■□□□ 1.07
ATXN1P54253 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ATXN1P54253 AL049796.1-201ENST00000565336 1766 ntBASIC21.75■■□□□ 1.07
ATXN1P54253 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ATXN1P54253 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.75■■□□□ 1.07
ATXN1P54253 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.75■■□□□ 1.07
ATXN1P54253 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.75■■□□□ 1.07
ATXN1P54253 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.75■■□□□ 1.07
ATXN1P54253 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN1P54253 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN1P54253 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN1P54253 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ATXN1P54253 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATXN1P54253 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATXN1P54253 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN1P54253 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.74■■□□□ 1.07
ATXN1P54253 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.74■■□□□ 1.07
ATXN1P54253 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.74■■□□□ 1.07
ATXN1P54253 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN1P54253 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN1P54253 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATXN1P54253 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN1P54253 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN1P54253 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN1P54253 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN1P54253 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
ATXN1P54253 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.73■■□□□ 1.07
ATXN1P54253 SLC29A4P1-201ENST00000398760 971 ntBASIC21.73■■□□□ 1.07
ATXN1P54253 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.73■■□□□ 1.07
ATXN1P54253 KRT18P20-201ENST00000548986 1279 ntBASIC21.73■■□□□ 1.07
ATXN1P54253 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
ATXN1P54253 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.73■■□□□ 1.07
ATXN1P54253 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN1P54253 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN1P54253 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.73■■□□□ 1.07
ATXN1P54253 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN1P54253 KRT16P2-201ENST00000414673 1423 ntBASIC21.72■■□□□ 1.07
ATXN1P54253 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.72■■□□□ 1.07
ATXN1P54253 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
ATXN1P54253 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.72■■□□□ 1.07
ATXN1P54253 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.72■■□□□ 1.07
ATXN1P54253 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.72■■□□□ 1.07
ATXN1P54253 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.72■■□□□ 1.07
ATXN1P54253 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.72■■□□□ 1.07
ATXN1P54253 MYCNOS-205ENST00000641950 531 ntBASIC21.72■■□□□ 1.07
ATXN1P54253 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN1P54253 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN1P54253 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.71■■□□□ 1.07
ATXN1P54253 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
ATXN1P54253 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN1P54253 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.71■■□□□ 1.07
ATXN1P54253 PRORSD1P-201ENST00000295112 541 ntBASIC21.71■■□□□ 1.07
ATXN1P54253 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.71■■□□□ 1.07
ATXN1P54253 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.71■■□□□ 1.07
ATXN1P54253 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.71■■□□□ 1.07
ATXN1P54253 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.71■■□□□ 1.07
ATXN1P54253 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.71■■□□□ 1.07
ATXN1P54253 AC133041.1-202ENST00000642053 222 ntBASIC21.71■■□□□ 1.07
ATXN1P54253 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ATXN1P54253 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN1P54253 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN1P54253 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.71■■□□□ 1.07
ATXN1P54253 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ATXN1P54253 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms