Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLNS1AP54105 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLNS1AP54105 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 Z98882.1-201ENST00000622160 2253 ntBASIC20.52■□□□□ 0.88
CLNS1AP54105 BX323043.1-201ENST00000641006 1765 ntBASIC20.52■□□□□ 0.88
CLNS1AP54105 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 AC098818.2-201ENST00000564925 2320 ntBASIC20.52■□□□□ 0.88
CLNS1AP54105 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CLNS1AP54105 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 OR2I1P-207ENST00000453522 948 ntBASIC20.52■□□□□ 0.88
CLNS1AP54105 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.52■□□□□ 0.88
CLNS1AP54105 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.52■□□□□ 0.88
CLNS1AP54105 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLNS1AP54105 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.52■□□□□ 0.88
CLNS1AP54105 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLNS1AP54105 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CLNS1AP54105 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLNS1AP54105 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.51■□□□□ 0.87
CLNS1AP54105 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.51■□□□□ 0.87
CLNS1AP54105 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLNS1AP54105 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CLNS1AP54105 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.5■□□□□ 0.87
CLNS1AP54105 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.5■□□□□ 0.87
CLNS1AP54105 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.5■□□□□ 0.87
CLNS1AP54105 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.5■□□□□ 0.87
CLNS1AP54105 MIR3181-201ENST00000578512 73 ntBASIC20.5■□□□□ 0.87
CLNS1AP54105 MIR3621-201ENST00000580529 85 ntBASIC20.5■□□□□ 0.87
CLNS1AP54105 AC104564.3-201ENST00000582367 638 ntBASIC20.5■□□□□ 0.87
CLNS1AP54105 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.5■□□□□ 0.87
CLNS1AP54105 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLNS1AP54105 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CLNS1AP54105 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.5■□□□□ 0.87
CLNS1AP54105 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.5■□□□□ 0.87
CLNS1AP54105 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.5■□□□□ 0.87
CLNS1AP54105 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLNS1AP54105 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 SRD5A1P1-201ENST00000442297 786 ntBASIC20.49■□□□□ 0.87
CLNS1AP54105 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CLNS1AP54105 AL035685.1-201ENST00000636663 812 ntBASIC20.49■□□□□ 0.87
CLNS1AP54105 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.49■□□□□ 0.87
CLNS1AP54105 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.49■□□□□ 0.87
CLNS1AP54105 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.49■□□□□ 0.87
CLNS1AP54105 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLNS1AP54105 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLNS1AP54105 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CLNS1AP54105 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.48■□□□□ 0.87
CLNS1AP54105 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.48■□□□□ 0.87
CLNS1AP54105 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLNS1AP54105 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CLNS1AP54105 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.48■□□□□ 0.87
CLNS1AP54105 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms