Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YAL026C-AYAL026C-A 438 nt3.83□□□□□ -1.8
HDA1P53973 RPL40BYKR094C 387 nt3.83□□□□□ -1.8
HDA1P53973 GOT1YMR292W 417 nt3.83□□□□□ -1.8
HDA1P53973 YMR018WYMR018W 1545 nt3.82□□□□□ -1.8
HDA1P53973 YDL009CYDL009C 324 nt3.82□□□□□ -1.8
HDA1P53973 ECO1YFR027W 846 nt3.82□□□□□ -1.8
HDA1P53973 RPS1AYLR441C 768 nt3.82□□□□□ -1.8
HDA1P53973 YMR122W-AYMR122W-A 255 nt3.82□□□□□ -1.8
HDA1P53973 YMR193C-AYMR193C-A 387 nt3.82□□□□□ -1.8
HDA1P53973 RPA135YPR010C 3612 nt3.82□□□□□ -1.8
HDA1P53973 SSE2YBR169C 2082 nt3.82□□□□□ -1.8
HDA1P53973 PCK1YKR097W 1650 nt3.81□□□□□ -1.8
HDA1P53973 MYO3YKL129C 3819 nt3.81□□□□□ -1.8
HDA1P53973 SNA4YDL123W 423 nt3.81□□□□□ -1.8
HDA1P53973 ARV1YLR242C 966 nt3.81□□□□□ -1.8
HDA1P53973 YNL146C-AYNL146C-A 195 nt3.81□□□□□ -1.8
HDA1P53973 PBS2YJL128C 2007 nt3.81□□□□□ -1.8
HDA1P53973 POL1YNL102W 4407 nt3.81□□□□□ -1.8
HDA1P53973 MCD4YKL165C 2760 nt3.81□□□□□ -1.8
HDA1P53973 YNL193WYNL193W 1677 nt3.81□□□□□ -1.8
HDA1P53973 YDR250CYDR250C 276 nt3.8□□□□□ -1.8
HDA1P53973 YDR526CYDR526C 471 nt3.8□□□□□ -1.8
HDA1P53973 NBL1YHR199C-A 222 nt3.8□□□□□ -1.8
HDA1P53973 tV(CAC)DtV(CAC)D 73 nt3.8□□□□□ -1.8
HDA1P53973 tV(CAC)HtV(CAC)H 73 nt3.8□□□□□ -1.8
HDA1P53973 SOD1YJR104C 465 nt3.8□□□□□ -1.8
HDA1P53973 PKR1YMR123W 369 nt3.8□□□□□ -1.8
HDA1P53973 DBF20YPR111W 1695 nt3.8□□□□□ -1.8
HDA1P53973 MSH4YFL003C 2637 nt3.8□□□□□ -1.8
HDA1P53973 YPS6YIR039C 1614 nt3.8□□□□□ -1.8
HDA1P53973 SRP68YPL243W 1800 nt3.79□□□□□ -1.8
HDA1P53973 TRK1YJL129C 3708 nt3.79□□□□□ -1.8
HDA1P53973 YBR012W-AYBR012W-A 1323 nt3.79□□□□□ -1.8
HDA1P53973 YOR142W-AYOR142W-A 1323 nt3.79□□□□□ -1.8
HDA1P53973 YPR158W-AYPR158W-A 1323 nt3.79□□□□□ -1.8
HDA1P53973 PAU10YDR542W 363 nt3.79□□□□□ -1.8
HDA1P53973 VFA1YER128W 612 nt3.79□□□□□ -1.8
HDA1P53973 YER181CYER181C 324 nt3.79□□□□□ -1.8
HDA1P53973 YFR054CYFR054C 579 nt3.79□□□□□ -1.8
HDA1P53973 PAU11YGL261C 363 nt3.79□□□□□ -1.8
HDA1P53973 PAU13YHL046C 363 nt3.79□□□□□ -1.8
HDA1P53973 DFG10YIL049W 762 nt3.79□□□□□ -1.8
HDA1P53973 YAL037WYAL037W 804 nt3.79□□□□□ -1.8
HDA1P53973 MRPL38YKL170W 417 nt3.79□□□□□ -1.8
HDA1P53973 YLR269CYLR269C 351 nt3.79□□□□□ -1.8
HDA1P53973 PAU4YLR461W 363 nt3.79□□□□□ -1.8
HDA1P53973 RPL18AYOL120C 561 nt3.79□□□□□ -1.8
HDA1P53973 YOL134CYOL134C 390 nt3.79□□□□□ -1.8
HDA1P53973 LTP1YPR073C 486 nt3.79□□□□□ -1.8
HDA1P53973 YPR022CYPR022C 3402 nt3.79□□□□□ -1.8
HDA1P53973 CAF130YGR134W 3369 nt3.79□□□□□ -1.8
HDA1P53973 MUB1YMR100W 1863 nt3.79□□□□□ -1.8
HDA1P53973 NRP1YDL167C 2160 nt3.79□□□□□ -1.8
HDA1P53973 ARG5,6YER069W 2592 nt3.78□□□□□ -1.8
HDA1P53973 HBT1YDL223C 3141 nt3.78□□□□□ -1.8
HDA1P53973 KIP3YGL216W 2418 nt3.78□□□□□ -1.8
HDA1P53973 YDL240C-AYDL240C-A 138 nt3.78□□□□□ -1.8
HDA1P53973 GEP4YHR100C 558 nt3.78□□□□□ -1.8
HDA1P53973 YKL136WYKL136W 399 nt3.78□□□□□ -1.8
HDA1P53973 BET3YKR068C 582 nt3.78□□□□□ -1.8
HDA1P53973 RMP1YLR145W 606 nt3.78□□□□□ -1.8
HDA1P53973 COX8YLR395C 237 nt3.78□□□□□ -1.8
HDA1P53973 YBR032WYBR032W 303 nt3.78□□□□□ -1.8
HDA1P53973 IRC16YPR038W 360 nt3.78□□□□□ -1.8
HDA1P53973 YRM1YOR172W 2361 nt3.78□□□□□ -1.8
HDA1P53973 ICR1ICR1 3199 nt3.77□□□□□ -1.81
HDA1P53973 FUN12YAL035W 3009 nt3.77□□□□□ -1.81
HDA1P53973 BMH2YDR099W 822 nt3.77□□□□□ -1.81
HDA1P53973 PHM6YDR281C 315 nt3.77□□□□□ -1.81
HDA1P53973 RPL27BYDR471W 411 nt3.77□□□□□ -1.81
HDA1P53973 LIF1YGL090W 1266 nt3.77□□□□□ -1.81
HDA1P53973 CWC24YLR323C 780 nt3.77□□□□□ -1.81
HDA1P53973 BSC3YLR465C 309 nt3.77□□□□□ -1.81
HDA1P53973 MRPL40YPL173W 894 nt3.77□□□□□ -1.81
HDA1P53973 YPL197CYPL197C 414 nt3.77□□□□□ -1.81
HDA1P53973 YPR108W-AYPR108W-A 213 nt3.77□□□□□ -1.81
HDA1P53973 PIS1YPR113W 663 nt3.77□□□□□ -1.81
HDA1P53973 SPE1YKL184W 1401 nt3.77□□□□□ -1.81
HDA1P53973 AKR1YDR264C 2295 nt3.77□□□□□ -1.81
HDA1P53973 GDI1YER136W 1356 nt3.76□□□□□ -1.81
HDA1P53973 VAC8YEL013W 1737 nt3.76□□□□□ -1.81
HDA1P53973 ARF1YDL192W 546 nt3.76□□□□□ -1.81
HDA1P53973 CRG1YHR209W 876 nt3.76□□□□□ -1.81
HDA1P53973 RRD2YPL152W 1077 nt3.76□□□□□ -1.81
HDA1P53973 VTC4YJL012C 2166 nt3.76□□□□□ -1.81
HDA1P53973 IOC2YLR095C 2439 nt3.75□□□□□ -1.81
HDA1P53973 GPI10YGL142C 1851 nt3.75□□□□□ -1.81
HDA1P53973 YCR090CYCR090C 549 nt3.75□□□□□ -1.81
HDA1P53973 GRX2YDR513W 432 nt3.75□□□□□ -1.81
HDA1P53973 SMX2YFL017W-A 234 nt3.75□□□□□ -1.81
HDA1P53973 YIL046W-AYIL046W-A 165 nt3.75□□□□□ -1.81
HDA1P53973 YAL004WYAL004W 648 nt3.75□□□□□ -1.81
HDA1P53973 SHH3YMR118C 591 nt3.75□□□□□ -1.81
HDA1P53973 YOR073W-AYOR073W-A 234 nt3.75□□□□□ -1.81
HDA1P53973 FMP23YBR047W 528 nt3.75□□□□□ -1.81
HDA1P53973 PEX5YDR244W 1839 nt3.74□□□□□ -1.81
HDA1P53973 ERB1YMR049C 2424 nt3.74□□□□□ -1.81
HDA1P53973 YDR061WYDR061W 1620 nt3.74□□□□□ -1.81
HDA1P53973 YEL1YBL060W 2064 nt3.74□□□□□ -1.81
HDA1P53973 CDC50YCR094W 1176 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 58.7 ms