Protein–RNA interactions for Protein: P52286

SKP1, Suppressor of kinetochore protein 1, yeast

Predictions only

Length 194 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	P52286	YJR030C	YJR030C	2238 nt		4.3	□□□□□ -1.72
SKP1	P52286	RDH54	YBR073W	2877 nt		4.3	□□□□□ -1.72
SKP1	P52286	MSH4	YFL003C	2637 nt		4.29	□□□□□ -1.72
SKP1	P52286	THI21	YPL258C	1656 nt		4.29	□□□□□ -1.72
SKP1	P52286	GCN20	YFR009W	2259 nt		4.29	□□□□□ -1.72
SKP1	P52286	LCB4	YOR171C	1875 nt		4.29	□□□□□ -1.72
SKP1	P52286	ERG28	YER044C	447 nt		4.29	□□□□□ -1.72
SKP1	P52286	RPL34A	YER056C-A	366 nt		4.29	□□□□□ -1.72
SKP1	P52286	YER066C-A	YER066C-A	501 nt		4.29	□□□□□ -1.72
SKP1	P52286	YIL066W-A	YIL066W-A	444 nt		4.29	□□□□□ -1.72
SKP1	P52286	YOL085W-A	YOL085W-A	213 nt		4.29	□□□□□ -1.72
SKP1	P52286	YOR318C	YOR318C	306 nt		4.29	□□□□□ -1.72
SKP1	P52286	YPL080C	YPL080C	327 nt		4.29	□□□□□ -1.72
SKP1	P52286	HO	YDL227C	1761 nt		4.29	□□□□□ -1.72
SKP1	P52286	TDA1	YMR291W	1761 nt		4.29	□□□□□ -1.72
SKP1	P52286	GAC1	YOR178C	2382 nt		4.28	□□□□□ -1.72
SKP1	P52286	MET12	YPL023C	1974 nt		4.28	□□□□□ -1.72
SKP1	P52286	AUA1	YFL010W-A	285 nt		4.28	□□□□□ -1.72
SKP1	P52286	YGL088W	YGL088W	366 nt		4.28	□□□□□ -1.72
SKP1	P52286	YHL034W-A	YHL034W-A	462 nt		4.28	□□□□□ -1.72
SKP1	P52286	RPS21B	YJL136C	264 nt		4.28	□□□□□ -1.72
SKP1	P52286	RPA34	YJL148W	702 nt		4.28	□□□□□ -1.72
SKP1	P52286	SLM6	YBR266C	453 nt		4.28	□□□□□ -1.72
SKP1	P52286	TOM70	YNL121C	1854 nt		4.28	□□□□□ -1.72
SKP1	P52286	FAP1	YNL023C	2898 nt		4.28	□□□□□ -1.73
SKP1	P52286	YKL100C	YKL100C	1764 nt		4.27	□□□□□ -1.73
SKP1	P52286	KRI1	YNL308C	1776 nt		4.27	□□□□□ -1.73
SKP1	P52286	ADP1	YCR011C	3150 nt		4.27	□□□□□ -1.73
SKP1	P52286	YAP1802	YGR241C	1707 nt		4.27	□□□□□ -1.73
SKP1	P52286	YKL222C	YKL222C	2118 nt		4.27	□□□□□ -1.73
SKP1	P52286	LHP1	YDL051W	828 nt		4.27	□□□□□ -1.73
SKP1	P52286	YDL211C	YDL211C	1119 nt		4.27	□□□□□ -1.73
SKP1	P52286	CDC26	YFR036W	375 nt		4.27	□□□□□ -1.73
SKP1	P52286	YFR056C	YFR056C	369 nt		4.27	□□□□□ -1.73
SKP1	P52286	VPS29	YHR012W	849 nt		4.27	□□□□□ -1.73
SKP1	P52286	ABF2	YMR072W	552 nt		4.27	□□□□□ -1.73
SKP1	P52286	YOR011W-A	YOR011W-A	207 nt		4.27	□□□□□ -1.73
SKP1	P52286	snR42	snR42	351 nt		4.27	□□□□□ -1.73
SKP1	P52286	DOA1	YKL213C	2148 nt		4.27	□□□□□ -1.73
SKP1	P52286	RSC3	YDR303C	2658 nt		4.27	□□□□□ -1.73
SKP1	P52286	VHC1	YBR235W	3363 nt		4.27	□□□□□ -1.73
SKP1	P52286	SNF12	YNR023W	1701 nt		4.26	□□□□□ -1.73
SKP1	P52286	EMP70	YLR083C	2004 nt		4.26	□□□□□ -1.73
SKP1	P52286	KIN82	YCR091W	2163 nt		4.26	□□□□□ -1.73
SKP1	P52286	WIP1	YDR374W-A	270 nt		4.26	□□□□□ -1.73
SKP1	P52286	PRE8	YML092C	753 nt		4.26	□□□□□ -1.73
SKP1	P52286	YBL073W	YBL073W	312 nt		4.26	□□□□□ -1.73
SKP1	P52286	PFY1	YOR122C	381 nt		4.26	□□□□□ -1.73
SKP1	P52286	YOR131C	YOR131C	657 nt		4.26	□□□□□ -1.73
SKP1	P52286	CYM1	YDR430C	2970 nt		4.26	□□□□□ -1.73
SKP1	P52286	VHR2	YER064C	1518 nt		4.26	□□□□□ -1.73
SKP1	P52286	NUP116	YMR047C	3342 nt		4.25	□□□□□ -1.73
SKP1	P52286	snR85	snR85	171 nt		4.25	□□□□□ -1.73
SKP1	P52286	HTA1	YDR225W	399 nt		4.25	□□□□□ -1.73
SKP1	P52286	SNX41	YDR425W	1878 nt		4.25	□□□□□ -1.73
SKP1	P52286	YEL067C	YEL067C	588 nt		4.25	□□□□□ -1.73
SKP1	P52286	YLR458W	YLR458W	381 nt		4.25	□□□□□ -1.73
SKP1	P52286	LSM2	YBL026W	288 nt		4.25	□□□□□ -1.73
SKP1	P52286	SEC6	YIL068C	2418 nt		4.25	□□□□□ -1.73
SKP1	P52286	PAN1	YIR006C	4443 nt		4.24	□□□□□ -1.73
SKP1	P52286	HOT1	YMR172W	2160 nt		4.24	□□□□□ -1.73
SKP1	P52286	PBS2	YJL128C	2007 nt		4.24	□□□□□ -1.73
SKP1	P52286	OPT2	YPR194C	2634 nt		4.24	□□□□□ -1.73
SKP1	P52286	YDR134C	YDR134C	411 nt		4.24	□□□□□ -1.73
SKP1	P52286	YDR344C	YDR344C	444 nt		4.24	□□□□□ -1.73
SKP1	P52286	YER091C-A	YER091C-A	222 nt		4.24	□□□□□ -1.73
SKP1	P52286	RAD6	YGL058W	519 nt		4.24	□□□□□ -1.73
SKP1	P52286	NSG1	YHR133C	876 nt		4.24	□□□□□ -1.73
SKP1	P52286	YIL020C-A	YIL020C-A	339 nt		4.24	□□□□□ -1.73
SKP1	P52286	RPL8B	YLL045C	771 nt		4.24	□□□□□ -1.73
SKP1	P52286	snR49	snR49	165 nt		4.24	□□□□□ -1.73
SKP1	P52286	ALO1	YML086C	1581 nt		4.23	□□□□□ -1.73
SKP1	P52286	SDH2	YLL041C	801 nt		4.23	□□□□□ -1.73
SKP1	P52286	TMA10	YLR327C	261 nt		4.23	□□□□□ -1.73
SKP1	P52286	IES4	YOR189W	351 nt		4.23	□□□□□ -1.73
SKP1	P52286	snR17b	snR17b	332 nt		4.23	□□□□□ -1.73
SKP1	P52286	LTP1	YPR073C	486 nt		4.23	□□□□□ -1.73
SKP1	P52286	ARP7	YPR034W	1434 nt		4.22	□□□□□ -1.73
SKP1	P52286	PRM15	YMR278W	1869 nt		4.22	□□□□□ -1.73
SKP1	P52286	PAU14	YIL176C	363 nt		4.22	□□□□□ -1.73
SKP1	P52286	PAU1	YJL223C	363 nt		4.22	□□□□□ -1.73
SKP1	P52286	GAL4	YPL248C	2646 nt		4.22	□□□□□ -1.73
SKP1	P52286	ATP22	YDR350C	2055 nt		4.22	□□□□□ -1.73
SKP1	P52286	CHL1	YPL008W	2586 nt		4.21	□□□□□ -1.73
SKP1	P52286	SRP68	YPL243W	1800 nt		4.21	□□□□□ -1.74
SKP1	P52286	TIF35	YDR429C	825 nt		4.21	□□□□□ -1.74
SKP1	P52286	RPS18A	YDR450W	441 nt		4.21	□□□□□ -1.74
SKP1	P52286	RPS26B	YER131W	360 nt		4.21	□□□□□ -1.74
SKP1	P52286	YGR269W	YGR269W	327 nt		4.21	□□□□□ -1.74
SKP1	P52286	RPC10	YHR143W-A	213 nt		4.21	□□□□□ -1.74
SKP1	P52286	PSY1	YKL076C	384 nt		4.21	□□□□□ -1.74
SKP1	P52286	YKL111C	YKL111C	336 nt		4.21	□□□□□ -1.74
SKP1	P52286	RPL37A	YLR185W	267 nt		4.21	□□□□□ -1.74
SKP1	P52286	YML057C-A	YML057C-A	390 nt		4.21	□□□□□ -1.74
SKP1	P52286	DAD3	YBR233W-A	285 nt		4.21	□□□□□ -1.74
SKP1	P52286	SMI1	YGR229C	1518 nt		4.21	□□□□□ -1.74
SKP1	P52286	PCF11	YDR228C	1881 nt		4.2	□□□□□ -1.74
SKP1	P52286	GPI10	YGL142C	1851 nt		4.2	□□□□□ -1.74
SKP1	P52286	YMR102C	YMR102C	2505 nt		4.2	□□□□□ -1.74
SKP1	P52286	YGR266W	YGR266W	2106 nt		4.2	□□□□□ -1.74

Retrieved 100 of 7,029 protein–RNA pairs in 186.3 ms