Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
HCFC1P51610 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HCFC1P51610 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 POM121L13P-201ENST00000422362 380 ntBASIC18.17■□□□□ 0.5
HCFC1P51610 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.17■□□□□ 0.5
HCFC1P51610 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC1P51610 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HCFC1P51610 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.16■□□□□ 0.5
HCFC1P51610 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.16■□□□□ 0.5
HCFC1P51610 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HCFC1P51610 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HCFC1P51610 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.16■□□□□ 0.5
HCFC1P51610 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.16■□□□□ 0.5
HCFC1P51610 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.16■□□□□ 0.5
HCFC1P51610 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.16■□□□□ 0.5
HCFC1P51610 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.16■□□□□ 0.5
HCFC1P51610 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.16■□□□□ 0.5
HCFC1P51610 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HCFC1P51610 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 AC026471.6-201ENST00000622954 1905 ntBASIC18.16■□□□□ 0.5
HCFC1P51610 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC1P51610 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HCFC1P51610 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.15■□□□□ 0.5
HCFC1P51610 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.15■□□□□ 0.5
HCFC1P51610 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.15■□□□□ 0.5
HCFC1P51610 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCFC1P51610 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
HCFC1P51610 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.14■□□□□ 0.5
HCFC1P51610 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCFC1P51610 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCFC1P51610 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.14■□□□□ 0.49
HCFC1P51610 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.14■□□□□ 0.49
HCFC1P51610 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HCFC1P51610 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCFC1P51610 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCFC1P51610 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HCFC1P51610 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HCFC1P51610 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
HCFC1P51610 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.14■□□□□ 0.49
HCFC1P51610 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.14■□□□□ 0.49
HCFC1P51610 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCFC1P51610 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.13■□□□□ 0.49
HCFC1P51610 AC073912.3-201ENST00000624414 853 ntBASIC18.13■□□□□ 0.49
HCFC1P51610 HLA-B-256ENST00000639848 1089 ntBASIC18.13■□□□□ 0.49
HCFC1P51610 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HCFC1P51610 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HCFC1P51610 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.13■□□□□ 0.49
HCFC1P51610 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.13■□□□□ 0.49
HCFC1P51610 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HCFC1P51610 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.13■□□□□ 0.49
HCFC1P51610 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.13■□□□□ 0.49
HCFC1P51610 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms