Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.11■■□□□ 1.29
CPT1AP50416 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.1■■□□□ 1.29
CPT1AP50416 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.1■■□□□ 1.29
CPT1AP50416 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.1■■□□□ 1.29
CPT1AP50416 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 C1QBPP2-201ENST00000528754 825 ntBASIC23.1■■□□□ 1.29
CPT1AP50416 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.1■■□□□ 1.29
CPT1AP50416 SOX15-203ENST00000570788 1093 ntBASIC23.1■■□□□ 1.29
CPT1AP50416 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
CPT1AP50416 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.1■■□□□ 1.29
CPT1AP50416 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
CPT1AP50416 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.1■■□□□ 1.29
CPT1AP50416 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPT1AP50416 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.09■■□□□ 1.29
CPT1AP50416 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.09■■□□□ 1.29
CPT1AP50416 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.09■■□□□ 1.29
CPT1AP50416 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CPT1AP50416 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.09■■□□□ 1.29
CPT1AP50416 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.09■■□□□ 1.29
CPT1AP50416 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.09■■□□□ 1.29
CPT1AP50416 RPPH1-201ENST00000516869 333 ntBASIC23.09■■□□□ 1.29
CPT1AP50416 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.09■■□□□ 1.29
CPT1AP50416 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.09■■□□□ 1.29
CPT1AP50416 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
CPT1AP50416 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CPT1AP50416 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CPT1AP50416 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
CPT1AP50416 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.08■■□□□ 1.29
CPT1AP50416 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CPT1AP50416 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.08■■□□□ 1.29
CPT1AP50416 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.08■■□□□ 1.29
CPT1AP50416 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.08■■□□□ 1.29
CPT1AP50416 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.08■■□□□ 1.29
CPT1AP50416 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CPT1AP50416 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CPT1AP50416 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.08■■□□□ 1.28
CPT1AP50416 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CPT1AP50416 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
CPT1AP50416 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPT1AP50416 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPT1AP50416 MIR718-201ENST00000390190 70 ntBASIC23.07■■□□□ 1.28
CPT1AP50416 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.07■■□□□ 1.28
CPT1AP50416 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.07■■□□□ 1.28
CPT1AP50416 RN7SL471P-201ENST00000580476 299 ntBASIC23.07■■□□□ 1.28
CPT1AP50416 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.07■■□□□ 1.28
CPT1AP50416 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.07■■□□□ 1.28
CPT1AP50416 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPT1AP50416 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPT1AP50416 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CPT1AP50416 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.07■■□□□ 1.28
CPT1AP50416 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPT1AP50416 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.06■■□□□ 1.28
CPT1AP50416 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
CPT1AP50416 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
CPT1AP50416 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.06■■□□□ 1.28
CPT1AP50416 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.06■■□□□ 1.28
CPT1AP50416 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CPT1AP50416 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CPT1AP50416 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.06■■□□□ 1.28
CPT1AP50416 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.06■■□□□ 1.28
CPT1AP50416 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.06■■□□□ 1.28
CPT1AP50416 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms