Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CSNK1DP48730 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1DP48730 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CSNK1DP48730 GPX1P1-201ENST00000388829 606 ntBASIC20.88■□□□□ 0.93
CSNK1DP48730 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CSNK1DP48730 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CSNK1DP48730 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.88■□□□□ 0.93
CSNK1DP48730 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.88■□□□□ 0.93
CSNK1DP48730 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1DP48730 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CSNK1DP48730 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1DP48730 AC011484.1-201ENST00000377652 1995 ntBASIC20.88■□□□□ 0.93
CSNK1DP48730 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1DP48730 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1DP48730 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1DP48730 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.87■□□□□ 0.93
CSNK1DP48730 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.87■□□□□ 0.93
CSNK1DP48730 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CSNK1DP48730 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1DP48730 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.87■□□□□ 0.93
CSNK1DP48730 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
CSNK1DP48730 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.87■□□□□ 0.93
CSNK1DP48730 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CSNK1DP48730 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1DP48730 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CSNK1DP48730 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.87■□□□□ 0.93
CSNK1DP48730 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1DP48730 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1DP48730 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
CSNK1DP48730 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1DP48730 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSNK1DP48730 ID1-201ENST00000376105 1233 ntBASIC20.86■□□□□ 0.93
CSNK1DP48730 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1DP48730 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.86■□□□□ 0.93
CSNK1DP48730 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1DP48730 AC105036.2-201ENST00000569468 176 ntBASIC20.86■□□□□ 0.93
CSNK1DP48730 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.86■□□□□ 0.93
CSNK1DP48730 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1DP48730 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1DP48730 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1DP48730 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1DP48730 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSNK1DP48730 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CSNK1DP48730 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1DP48730 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1DP48730 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1DP48730 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1DP48730 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1DP48730 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CSNK1DP48730 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1DP48730 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1DP48730 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1DP48730 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1DP48730 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1DP48730 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1DP48730 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1DP48730 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1DP48730 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.84■□□□□ 0.93
CSNK1DP48730 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.84■□□□□ 0.93
CSNK1DP48730 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1DP48730 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1DP48730 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.84■□□□□ 0.93
CSNK1DP48730 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1DP48730 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1DP48730 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1DP48730 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1DP48730 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1DP48730 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.83■□□□□ 0.93
CSNK1DP48730 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1DP48730 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1DP48730 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CSNK1DP48730 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1DP48730 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1DP48730 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1DP48730 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CSNK1DP48730 GUSBP6-202ENST00000438529 1198 ntBASIC20.83■□□□□ 0.93
CSNK1DP48730 TSPY6P-201ENST00000448518 926 ntBASIC20.83■□□□□ 0.93
CSNK1DP48730 AC093787.1-201ENST00000450396 207 ntBASIC20.83■□□□□ 0.93
CSNK1DP48730 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1DP48730 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.83■□□□□ 0.93
CSNK1DP48730 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.83■□□□□ 0.93
CSNK1DP48730 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.83■□□□□ 0.93
CSNK1DP48730 AC010980.2-201ENST00000587099 1412 ntBASIC20.83■□□□□ 0.93
CSNK1DP48730 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1DP48730 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.83■□□□□ 0.92
CSNK1DP48730 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
CSNK1DP48730 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1DP48730 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1DP48730 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1DP48730 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1DP48730 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CSNK1DP48730 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1DP48730 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CSNK1DP48730 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1DP48730 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CSNK1DP48730 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1DP48730 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CSNK1DP48730 AL109923.1-201ENST00000618799 583 ntBASIC20.82■□□□□ 0.92
CSNK1DP48730 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1DP48730 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms