Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.063e-7■■■■□ 23.1
MATR3P43243 PPFIBP2-220ENST00000532172 817 ntTSL 38.32□□□□□ -1.083e-7■■■■□ 23.1
MATR3P43243 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.31□□□□□ -2.043e-7■■■■□ 23.1
MATR3P43243 SND1-206ENST00000468166 552 ntTSL 48.71□□□□□ -1.027e-7■■■■□ 23.1
MATR3P43243 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.195e-7■■■■□ 23.1
MATR3P43243 CENPK-206ENST00000506282 658 ntTSL 514.29□□□□□ -0.125e-7■■■■□ 23.1
MATR3P43243 CENPK-216ENST00000515497 653 ntTSL 314.29□□□□□ -0.125e-7■■■■□ 23.1
MATR3P43243 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.245e-7■■■■□ 23.1
MATR3P43243 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC8.73□□□□□ -1.015e-7■■■■□ 23.1
MATR3P43243 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.27□□□□□ -1.255e-7■■■■□ 23.1
MATR3P43243 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.09□□□□□ -1.435e-7■■■■□ 23.1
MATR3P43243 CENPK-205ENST00000505960 834 ntTSL 55.96□□□□□ -1.465e-7■■■■□ 23.1
MATR3P43243 CENPK-217ENST00000515873 279 ntTSL 55.42□□□□□ -1.545e-7■■■■□ 23.1
MATR3P43243 CENPK-212ENST00000510768 725 ntTSL 53.89□□□□□ -1.795e-7■■■■□ 23.1
MATR3P43243 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC12.6□□□□□ -0.391e-7■■■■□ 23.1
MATR3P43243 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.321e-8■■■■□ 23.1
MATR3P43243 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.87□□□□□ -1.311e-8■■■■□ 23.1
MATR3P43243 URI1-203ENST00000570564 514 ntTSL 45.23□□□□□ -1.578e-7■■■■□ 23
MATR3P43243 ADNP2-204ENST00000560752 880 ntTSL 530.28■■■□□ 2.443e-7■■■■□ 23
MATR3P43243 ADNP2-202ENST00000559951 823 ntTSL 322.87■■□□□ 1.253e-7■■■■□ 23
MATR3P43243 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.963e-7■■■■□ 23
MATR3P43243 ADNP2-205ENST00000561195 124 ntTSL 36.21□□□□□ -1.423e-7■■■■□ 23
MATR3P43243 ADNP2-203ENST00000560561 647 ntTSL 34.42□□□□□ -1.73e-7■■■■□ 23
MATR3P43243 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.01■□□□□ 0.319e-7■■■■□ 23
MATR3P43243 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.59■□□□□ 0.099e-7■■■■□ 23
MATR3P43243 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.079e-7■■■■□ 23
MATR3P43243 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.22■□□□□ 0.039e-7■■■■□ 23
MATR3P43243 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.09■□□□□ 0.019e-7■■■■□ 23
MATR3P43243 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.03■□□□□ -09e-7■■■■□ 23
MATR3P43243 DDC-205ENST00000430300 1470 ntTSL 514.82□□□□□ -0.049e-7■■■■□ 23
MATR3P43243 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.069e-7■■■■□ 23
MATR3P43243 DDC-206ENST00000431062 1620 ntTSL 5 BASIC14.49□□□□□ -0.099e-7■■■■□ 23
MATR3P43243 DDC-208ENST00000444733 1725 ntTSL 312.62□□□□□ -0.399e-7■■■■□ 23
MATR3P43243 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.869e-7■■■■□ 23
MATR3P43243 NCOA5-202ENST00000372291 727 ntTSL 326.99■■□□□ 1.919e-6■■■■□ 23
MATR3P43243 IL4R-206ENST00000562142 518 ntTSL 326.99■■□□□ 1.919e-6■■■■□ 23
MATR3P43243 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.839e-6■■■■□ 23
MATR3P43243 IL4R-216ENST00000566117 529 ntTSL 525.31■■□□□ 1.649e-6■■■■□ 23
MATR3P43243 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.499e-6■■■■□ 23
MATR3P43243 SNX13-206ENST00000474067 603 ntTSL 322.43■■□□□ 1.187e-6■■■■□ 23
MATR3P43243 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.4■■□□□ 1.189e-6■■■■□ 23
MATR3P43243 RNASET2-204ENST00000421787 1924 ntTSL 222.18■■□□□ 1.149e-6■■■■□ 23
MATR3P43243 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.79■■□□□ 1.089e-6■■■■□ 23
MATR3P43243 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.999e-6■■■■□ 23
MATR3P43243 CTNNBL1-205ENST00000447935 778 ntTSL 520.94■□□□□ 0.949e-6■■■■□ 23
MATR3P43243 PHF14-206ENST00000476009 1044 ntTSL 320.93■□□□□ 0.949e-6■■■■□ 23
MATR3P43243 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.61■□□□□ 0.899e-6■■■■□ 23
MATR3P43243 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.869e-6■■■■□ 23
MATR3P43243 RNASET2-201ENST00000028008 1220 ntTSL 520.17■□□□□ 0.829e-6■■■■□ 23
MATR3P43243 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.12■□□□□ 0.819e-6■■■■□ 23
MATR3P43243 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.99■□□□□ 0.799e-6■■■■□ 23
MATR3P43243 RNASET2-207ENST00000478180 963 ntTSL 519.65■□□□□ 0.749e-6■■■■□ 23
MATR3P43243 MCFD2-213ENST00000470873 552 ntTSL 419.62■□□□□ 0.739e-6■■■■□ 23
MATR3P43243 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.32■□□□□ 0.689e-6■■■■□ 23
MATR3P43243 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.669e-6■■■■□ 23
MATR3P43243 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.669e-6■■■■□ 23
MATR3P43243 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.649e-6■■■■□ 23
MATR3P43243 ADAM10-212ENST00000558004 587 ntTSL 519.04■□□□□ 0.649e-6■■■■□ 23
MATR3P43243 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.03■□□□□ 0.649e-6■■■■□ 23
MATR3P43243 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.599e-6■■■■□ 23
MATR3P43243 MCFD2-209ENST00000412438 588 ntTSL 318.74■□□□□ 0.599e-6■■■■□ 23
MATR3P43243 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.559e-6■■■■□ 23
MATR3P43243 ADAM10-216ENST00000561149 529 ntTSL 418.32■□□□□ 0.529e-6■■■■□ 23
MATR3P43243 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.519e-6■■■■□ 23
MATR3P43243 RNASET2-202ENST00000358165 2445 ntTSL 218.06■□□□□ 0.489e-6■■■■□ 23
MATR3P43243 IL4R-217ENST00000566318 688 ntTSL 317.9■□□□□ 0.469e-6■■■■□ 23
MATR3P43243 MCFD2-214ENST00000477791 665 ntTSL 217.82■□□□□ 0.449e-6■■■■□ 23
MATR3P43243 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.389e-6■■■■□ 23
MATR3P43243 PHF14-210ENST00000490957 4058 ntTSL 517.37■□□□□ 0.379e-6■■■■□ 23
MATR3P43243 MCFD2-217ENST00000493804 807 ntTSL 217.26■□□□□ 0.359e-6■■■■□ 23
MATR3P43243 IL4R-204ENST00000561742 379 ntTSL 316.88■□□□□ 0.299e-6■■■■□ 23
MATR3P43243 IL4R-211ENST00000563926 594 ntTSL 416.88■□□□□ 0.299e-6■■■■□ 23
MATR3P43243 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.269e-6■■■■□ 23
MATR3P43243 SNX13-205ENST00000471744 454 ntTSL 416.54■□□□□ 0.247e-6■■■■□ 23
MATR3P43243 SNX13-207ENST00000475800 507 ntTSL 416.54■□□□□ 0.247e-6■■■■□ 23
MATR3P43243 MCFD2-216ENST00000487121 627 ntTSL 316.43■□□□□ 0.229e-6■■■■□ 23
MATR3P43243 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.219e-6■■■■□ 23
MATR3P43243 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.32■□□□□ 0.29e-6■■■■□ 23
MATR3P43243 ADAM10-213ENST00000558733 995 ntTSL 316.14■□□□□ 0.179e-6■■■■□ 23
MATR3P43243 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.159e-6■■■■□ 23
MATR3P43243 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.83■□□□□ 0.129e-6■■■■□ 23
MATR3P43243 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.129e-6■■■■□ 23
MATR3P43243 ADAM10-215ENST00000560608 587 ntTSL 415.44■□□□□ 0.069e-6■■■■□ 23
MATR3P43243 ADAM10-204ENST00000439637 601 ntTSL 315.09■□□□□ 0.019e-6■■■■□ 23
MATR3P43243 IL4R-208ENST00000563002 541 ntTSL 514.99□□□□□ -0.019e-6■■■■□ 23
MATR3P43243 IL4R-209ENST00000563787 701 ntTSL 314.88□□□□□ -0.039e-6■■■■□ 23
MATR3P43243 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC14.77□□□□□ -0.059e-6■■■■□ 23
MATR3P43243 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.069e-6■■■■□ 23
MATR3P43243 IL4R-218ENST00000568746 2900 ntTSL 214.69□□□□□ -0.069e-6■■■■□ 23
MATR3P43243 MCFD2-210ENST00000417180 565 ntTSL 414.28□□□□□ -0.129e-6■■■■□ 23
MATR3P43243 MCFD2-215ENST00000479225 568 ntTSL 314.22□□□□□ -0.139e-6■■■■□ 23
MATR3P43243 SNX13-202ENST00000409604 4146 ntTSL 1 (best) BASIC13.1□□□□□ -0.317e-6■■■■□ 23
MATR3P43243 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC12.63□□□□□ -0.399e-6■■■■□ 23
MATR3P43243 IL4R-205ENST00000561946 611 ntTSL 312.38□□□□□ -0.439e-6■■■■□ 23
MATR3P43243 RNASET2-209ENST00000499370 2164 ntTSL 212.15□□□□□ -0.469e-6■■■■□ 23
MATR3P43243 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.489e-6■■■■□ 23
MATR3P43243 CTNNBL1-210ENST00000628103 1958 ntTSL 2 BASIC11.84□□□□□ -0.519e-6■■■■□ 23
MATR3P43243 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.529e-6■■■■□ 23
MATR3P43243 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.539e-6■■■■□ 23
MATR3P43243 IL4R-202ENST00000395762 3685 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.549e-6■■■■□ 23
Retrieved 100 of 16,209 protein–RNA pairs in 97.6 ms