Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GRIA1P42261 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GRIA1P42261 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GRIA1P42261 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21■□□□□ 0.95
GRIA1P42261 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21■□□□□ 0.95
GRIA1P42261 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21■□□□□ 0.95
GRIA1P42261 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 POU5F1P4-201ENST00000413175 1085 ntBASIC21■□□□□ 0.95
GRIA1P42261 SLC7A5P2-201ENST00000553010 536 ntBASIC21■□□□□ 0.95
GRIA1P42261 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21■□□□□ 0.95
GRIA1P42261 RARRES2P11-201ENST00000635158 484 ntBASIC21■□□□□ 0.95
GRIA1P42261 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GRIA1P42261 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
GRIA1P42261 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21■□□□□ 0.95
GRIA1P42261 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.99■□□□□ 0.95
GRIA1P42261 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.99■□□□□ 0.95
GRIA1P42261 AC010141.2-201ENST00000452426 721 ntBASIC20.99■□□□□ 0.95
GRIA1P42261 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.99■□□□□ 0.95
GRIA1P42261 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRIA1P42261 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
GRIA1P42261 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
GRIA1P42261 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
GRIA1P42261 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
GRIA1P42261 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
GRIA1P42261 AC011484.1-201ENST00000377652 1995 ntBASIC20.98■□□□□ 0.95
GRIA1P42261 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.98■□□□□ 0.95
GRIA1P42261 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.98■□□□□ 0.95
GRIA1P42261 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.98■□□□□ 0.95
GRIA1P42261 FP700111.2-201ENST00000619190 1892 ntBASIC20.98■□□□□ 0.95
GRIA1P42261 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRIA1P42261 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GRIA1P42261 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
GRIA1P42261 AC004854.2-201ENST00000608450 1441 ntBASIC20.97■□□□□ 0.95
GRIA1P42261 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA1P42261 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GRIA1P42261 KRT18P14-201ENST00000534205 1250 ntBASIC20.97■□□□□ 0.95
GRIA1P42261 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA1P42261 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.97■□□□□ 0.95
GRIA1P42261 KRT18P61-201ENST00000585825 1298 ntBASIC20.97■□□□□ 0.95
GRIA1P42261 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA1P42261 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA1P42261 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA1P42261 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.97■□□□□ 0.95
GRIA1P42261 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA1P42261 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GRIA1P42261 AL391422.3-201ENST00000603791 2761 ntBASIC20.97■□□□□ 0.95
GRIA1P42261 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GRIA1P42261 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA1P42261 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GRIA1P42261 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.96■□□□□ 0.95
GRIA1P42261 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.96■□□□□ 0.95
GRIA1P42261 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
GRIA1P42261 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.96■□□□□ 0.95
GRIA1P42261 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GRIA1P42261 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.96■□□□□ 0.95
GRIA1P42261 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.96■□□□□ 0.95
GRIA1P42261 AP001160.3-201ENST00000601484 763 ntBASIC20.96■□□□□ 0.95
GRIA1P42261 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.96■□□□□ 0.95
GRIA1P42261 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms