Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 CRS5YOR031W 210 nt2.36□□□□□ -2.03
RTR1P40084 GCY1YOR120W 939 nt2.36□□□□□ -2.03
RTR1P40084 CBP6YBR120C 489 nt2.36□□□□□ -2.03
RTR1P40084 RTG3YBL103C 1461 nt2.36□□□□□ -2.03
RTR1P40084 YGL176CYGL176C 1665 nt2.36□□□□□ -2.03
RTR1P40084 YJL181WYJL181W 1836 nt2.35□□□□□ -2.03
RTR1P40084 FAB1YFR019W 6837 nt2.35□□□□□ -2.03
RTR1P40084 SCY1YGL083W 2415 nt2.35□□□□□ -2.03
RTR1P40084 MRP10YDL045W-A 288 nt2.35□□□□□ -2.03
RTR1P40084 CPR5YDR304C 678 nt2.35□□□□□ -2.03
RTR1P40084 YFH7YFR007W 1062 nt2.35□□□□□ -2.03
RTR1P40084 SAE2YGL175C 1038 nt2.35□□□□□ -2.03
RTR1P40084 YGR050CYGR050C 357 nt2.35□□□□□ -2.03
RTR1P40084 YGR226CYGR226C 210 nt2.35□□□□□ -2.03
RTR1P40084 ECI1YLR284C 843 nt2.35□□□□□ -2.03
RTR1P40084 YMR099CYMR099C 894 nt2.35□□□□□ -2.03
RTR1P40084 YMR181CYMR181C 465 nt2.35□□□□□ -2.03
RTR1P40084 APC2YLR127C 2562 nt2.35□□□□□ -2.03
RTR1P40084 ARK1YNL020C 1917 nt2.34□□□□□ -2.03
RTR1P40084 ROY1YMR258C 1662 nt2.34□□□□□ -2.03
RTR1P40084 MDM36YPR083W 1740 nt2.34□□□□□ -2.03
RTR1P40084 NOP56YLR197W 1515 nt2.34□□□□□ -2.03
RTR1P40084 YHR182C-AYHR182C-A 474 nt2.34□□□□□ -2.03
RTR1P40084 PET191YJR034W 327 nt2.34□□□□□ -2.03
RTR1P40084 YNL046WYNL046W 519 nt2.34□□□□□ -2.03
RTR1P40084 PEX15YOL044W 1152 nt2.34□□□□□ -2.03
RTR1P40084 YOR020W-AYOR020W-A 273 nt2.34□□□□□ -2.03
RTR1P40084 YOR392WYOR392W 444 nt2.34□□□□□ -2.03
RTR1P40084 YBR197CYBR197C 654 nt2.34□□□□□ -2.03
RTR1P40084 HSC82YMR186W 2118 nt2.33□□□□□ -2.04
RTR1P40084 YFH1YDL120W 525 nt2.33□□□□□ -2.04
RTR1P40084 YGL258W-AYGL258W-A 234 nt2.33□□□□□ -2.04
RTR1P40084 YHR212CYHR212C 336 nt2.33□□□□□ -2.04
RTR1P40084 YAR060CYAR060C 336 nt2.33□□□□□ -2.04
RTR1P40084 RPS10BYMR230W 318 nt2.33□□□□□ -2.04
RTR1P40084 POS5YPL188W 1245 nt2.33□□□□□ -2.04
RTR1P40084 SPP381YBR152W 876 nt2.33□□□□□ -2.04
RTR1P40084 TRS130YMR218C 3309 nt2.32□□□□□ -2.04
RTR1P40084 COG2YGR120C 789 nt2.32□□□□□ -2.04
RTR1P40084 YAL034C-BYAL034C-B 354 nt2.32□□□□□ -2.04
RTR1P40084 YAL042C-AYAL042C-A 378 nt2.32□□□□□ -2.04
RTR1P40084 YKL131WYKL131W 522 nt2.32□□□□□ -2.04
RTR1P40084 YLR042CYLR042C 486 nt2.32□□□□□ -2.04
RTR1P40084 NGL1YOL042W 1092 nt2.32□□□□□ -2.04
RTR1P40084 GRX7YBR014C 612 nt2.32□□□□□ -2.04
RTR1P40084 snR35snR35 204 nt2.32□□□□□ -2.04
RTR1P40084 YNR066CYNR066C 1311 nt2.32□□□□□ -2.04
RTR1P40084 HOS4YIL112W 3252 nt2.31□□□□□ -2.04
RTR1P40084 AIM6YDL237W 1173 nt2.31□□□□□ -2.04
RTR1P40084 RMD5YDR255C 1266 nt2.31□□□□□ -2.04
RTR1P40084 YRO2YBR054W 1035 nt2.31□□□□□ -2.04
RTR1P40084 SUT2YPR009W 807 nt2.31□□□□□ -2.04
RTR1P40084 RRP7YCL031C 894 nt2.31□□□□□ -2.04
RTR1P40084 STD1YOR047C 1335 nt2.31□□□□□ -2.04
RTR1P40084 CST9YLR394W 1449 nt2.31□□□□□ -2.04
RTR1P40084 RGL1YPL066W 1440 nt2.31□□□□□ -2.04
RTR1P40084 AI4Q0065 1671 nt2.31□□□□□ -2.04
RTR1P40084 SYO1YDL063C 1863 nt2.31□□□□□ -2.04
RTR1P40084 TIM9YEL020W-A 264 nt2.3□□□□□ -2.04
RTR1P40084 YHL006W-AYHL006W-A 354 nt2.3□□□□□ -2.04
RTR1P40084 BOS1YLR078C 735 nt2.3□□□□□ -2.04
RTR1P40084 IRC20YLR247C 4671 nt2.3□□□□□ -2.04
RTR1P40084 JJJ2YJL162C 1752 nt2.3□□□□□ -2.04
RTR1P40084 YJR098CYJR098C 1971 nt2.3□□□□□ -2.04
RTR1P40084 ARP9YMR033W 1404 nt2.29□□□□□ -2.04
RTR1P40084 YDR124WYDR124W 975 nt2.29□□□□□ -2.04
RTR1P40084 TDA10YGR205W 873 nt2.29□□□□□ -2.04
RTR1P40084 YHL044WYHL044W 708 nt2.29□□□□□ -2.04
RTR1P40084 YJL202CYJL202C 348 nt2.29□□□□□ -2.04
RTR1P40084 CCL1YPR025C 1182 nt2.29□□□□□ -2.04
RTR1P40084 RPC40YPR110C 1008 nt2.29□□□□□ -2.04
RTR1P40084 GCD2YGR083C 1956 nt2.29□□□□□ -2.04
RTR1P40084 snR76snR76 109 nt2.28□□□□□ -2.04
RTR1P40084 YOL024WYOL024W 519 nt2.28□□□□□ -2.04
RTR1P40084 FYV12YOR183W 390 nt2.28□□□□□ -2.04
RTR1P40084 ERV15YBR210W 429 nt2.28□□□□□ -2.04
RTR1P40084 CSF1YLR087C 8877 nt2.28□□□□□ -2.04
RTR1P40084 YDR131CYDR131C 1671 nt2.28□□□□□ -2.05
RTR1P40084 NUP100YKL068W 2880 nt2.28□□□□□ -2.05
RTR1P40084 VMA10YHR039C-A 345 nt2.27□□□□□ -2.05
RTR1P40084 YIL046W-AYIL046W-A 165 nt2.27□□□□□ -2.05
RTR1P40084 MET14YKL001C 609 nt2.27□□□□□ -2.05
RTR1P40084 DIS3YOL021C 3006 nt2.26□□□□□ -2.05
RTR1P40084 INP51YIL002C 2841 nt2.26□□□□□ -2.05
RTR1P40084 YPD1YDL235C 504 nt2.26□□□□□ -2.05
RTR1P40084 TWF1YGR080W 999 nt2.26□□□□□ -2.05
RTR1P40084 ARC18YLR370C 537 nt2.26□□□□□ -2.05
RTR1P40084 VPS34YLR240W 2628 nt2.26□□□□□ -2.05
RTR1P40084 RRP12YPL012W 3687 nt2.26□□□□□ -2.05
RTR1P40084 YDR170W-AYDR170W-A 1323 nt2.25□□□□□ -2.05
RTR1P40084 YNL284C-AYNL284C-A 1323 nt2.25□□□□□ -2.05
RTR1P40084 YCT1YLL055W 1596 nt2.25□□□□□ -2.05
RTR1P40084 RGI1YER067W 486 nt2.25□□□□□ -2.05
RTR1P40084 YER068C-AYER068C-A 432 nt2.25□□□□□ -2.05
RTR1P40084 YMR31YFR049W 372 nt2.25□□□□□ -2.05
RTR1P40084 IMP3YHR148W 552 nt2.25□□□□□ -2.05
RTR1P40084 UTP30YKR060W 825 nt2.25□□□□□ -2.05
RTR1P40084 YMR320WYMR320W 306 nt2.25□□□□□ -2.05
RTR1P40084 snR191snR191 274 nt2.25□□□□□ -2.05
RTR1P40084 ALY1YKR021W 2748 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms