Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.47■■□□□ 1.83
COL15A1P39059 AC233263.1-201ENST00000578059 224 ntBASIC26.47■■□□□ 1.83
COL15A1P39059 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
COL15A1P39059 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL15A1P39059 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL15A1P39059 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
COL15A1P39059 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
COL15A1P39059 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL15A1P39059 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.46■■□□□ 1.83
COL15A1P39059 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.46■■□□□ 1.83
COL15A1P39059 RPPH1-201ENST00000516869 333 ntBASIC26.46■■□□□ 1.83
COL15A1P39059 C1QBPP2-201ENST00000528754 825 ntBASIC26.46■■□□□ 1.83
COL15A1P39059 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.46■■□□□ 1.83
COL15A1P39059 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL15A1P39059 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.46■■□□□ 1.83
COL15A1P39059 AC010542.4-201ENST00000563151 1910 ntBASIC26.46■■□□□ 1.83
COL15A1P39059 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL15A1P39059 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL15A1P39059 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.46■■□□□ 1.83
COL15A1P39059 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.46■■□□□ 1.83
COL15A1P39059 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL15A1P39059 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.45■■□□□ 1.83
COL15A1P39059 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
COL15A1P39059 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.45■■□□□ 1.83
COL15A1P39059 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
COL15A1P39059 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
COL15A1P39059 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.45■■□□□ 1.82
COL15A1P39059 AC007322.3-201ENST00000426526 701 ntBASIC26.45■■□□□ 1.82
COL15A1P39059 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.45■■□□□ 1.82
COL15A1P39059 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL15A1P39059 SOX15-203ENST00000570788 1093 ntBASIC26.45■■□□□ 1.82
COL15A1P39059 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.45■■□□□ 1.82
COL15A1P39059 FAM197Y4-202ENST00000622692 608 ntBASIC26.45■■□□□ 1.82
COL15A1P39059 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.45■■□□□ 1.82
COL15A1P39059 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.44■■□□□ 1.82
COL15A1P39059 KRT18P68-201ENST00000392293 1000 ntBASIC26.44■■□□□ 1.82
COL15A1P39059 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.44■■□□□ 1.82
COL15A1P39059 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.44■■□□□ 1.82
COL15A1P39059 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.44■■□□□ 1.82
COL15A1P39059 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.44■■□□□ 1.82
COL15A1P39059 AC069544.1-201ENST00000609399 999 ntBASIC26.44■■□□□ 1.82
COL15A1P39059 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL15A1P39059 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.43■■□□□ 1.82
COL15A1P39059 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.43■■□□□ 1.82
COL15A1P39059 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL15A1P39059 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
COL15A1P39059 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.42■■□□□ 1.82
COL15A1P39059 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
COL15A1P39059 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.42■■□□□ 1.82
COL15A1P39059 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.42■■□□□ 1.82
COL15A1P39059 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.42■■□□□ 1.82
COL15A1P39059 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL15A1P39059 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.41■■□□□ 1.82
COL15A1P39059 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.41■■□□□ 1.82
COL15A1P39059 CYP21A1P-202ENST00000354927 1481 ntBASIC26.41■■□□□ 1.82
COL15A1P39059 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms