Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YHL026CYHL026C 948 nt3.53□□□□□ -1.84
TDP1P38319 YHR214C-EYHR214C-E 300 nt3.53□□□□□ -1.84
TDP1P38319 YKL162C-AYKL162C-A 153 nt3.53□□□□□ -1.84
TDP1P38319 YKE2YLR200W 345 nt3.53□□□□□ -1.84
TDP1P38319 YAR070CYAR070C 300 nt3.53□□□□□ -1.84
TDP1P38319 YMR013C-AYMR013C-A 150 nt3.53□□□□□ -1.84
TDP1P38319 NOP15YNL110C 663 nt3.53□□□□□ -1.84
TDP1P38319 YNL184CYNL184C 327 nt3.53□□□□□ -1.84
TDP1P38319 LDS2YOL047C 1071 nt3.53□□□□□ -1.84
TDP1P38319 MBA1YBR185C 837 nt3.53□□□□□ -1.84
TDP1P38319 VIP1YLR410W 3441 nt3.53□□□□□ -1.85
TDP1P38319 NSP1YJL041W 2472 nt3.52□□□□□ -1.85
TDP1P38319 YLR352WYLR352W 2424 nt3.52□□□□□ -1.85
TDP1P38319 RPS14AYCR031C 414 nt3.52□□□□□ -1.85
TDP1P38319 GRX2YDR513W 432 nt3.52□□□□□ -1.85
TDP1P38319 YEL032C-AYEL032C-A 162 nt3.52□□□□□ -1.85
TDP1P38319 PDX1YGR193C 1233 nt3.52□□□□□ -1.85
TDP1P38319 IGO2YHR132W-A 396 nt3.52□□□□□ -1.85
TDP1P38319 SOD1YJR104C 465 nt3.52□□□□□ -1.85
TDP1P38319 MRPL38YKL170W 417 nt3.52□□□□□ -1.85
TDP1P38319 YAL063C-AYAL063C-A 291 nt3.52□□□□□ -1.85
TDP1P38319 YLR269CYLR269C 351 nt3.52□□□□□ -1.85
TDP1P38319 YLR434CYLR434C 384 nt3.52□□□□□ -1.85
TDP1P38319 SRL1YOR247W 633 nt3.52□□□□□ -1.85
TDP1P38319 NSL1YPL233W 651 nt3.52□□□□□ -1.85
TDP1P38319 ARR2YPR200C 393 nt3.52□□□□□ -1.85
TDP1P38319 YBR201C-AYBR201C-A 204 nt3.52□□□□□ -1.85
TDP1P38319 HDA2YDR295C 2025 nt3.52□□□□□ -1.85
TDP1P38319 RRI2YOL117W 1938 nt3.52□□□□□ -1.85
TDP1P38319 PEX1YKL197C 3132 nt3.52□□□□□ -1.85
TDP1P38319 SPE1YKL184W 1401 nt3.52□□□□□ -1.85
TDP1P38319 AYT1YLL063C 1425 nt3.52□□□□□ -1.85
TDP1P38319 IRC3YDR332W 2070 nt3.51□□□□□ -1.85
TDP1P38319 YNR063WYNR063W 1824 nt3.51□□□□□ -1.85
TDP1P38319 SPT16YGL207W 3108 nt3.51□□□□□ -1.85
TDP1P38319 BAR1YIL015W 1764 nt3.51□□□□□ -1.85
TDP1P38319 BYE1YKL005C 1785 nt3.51□□□□□ -1.85
TDP1P38319 CWH43YCR017C 2862 nt3.51□□□□□ -1.85
TDP1P38319 SPG3YDR504C 384 nt3.51□□□□□ -1.85
TDP1P38319 GCN4YEL009C 846 nt3.51□□□□□ -1.85
TDP1P38319 YER137W-AYER137W-A 306 nt3.51□□□□□ -1.85
TDP1P38319 NBL1YHR199C-A 222 nt3.51□□□□□ -1.85
TDP1P38319 ANB1YJR047C 474 nt3.51□□□□□ -1.85
TDP1P38319 AIM32YML050W 936 nt3.51□□□□□ -1.85
TDP1P38319 LCB5YLR260W 2064 nt3.51□□□□□ -1.85
TDP1P38319 SLK19YOR195W 2466 nt3.51□□□□□ -1.85
TDP1P38319 TGL3YMR313C 1929 nt3.5□□□□□ -1.85
TDP1P38319 SPA2YLL021W 4401 nt3.5□□□□□ -1.85
TDP1P38319 ARO80YDR421W 2853 nt3.5□□□□□ -1.85
TDP1P38319 YCR045W-AYCR045W-A 351 nt3.5□□□□□ -1.85
TDP1P38319 PHM6YDR281C 315 nt3.5□□□□□ -1.85
TDP1P38319 YDR413CYDR413C 576 nt3.5□□□□□ -1.85
TDP1P38319 YER097WYER097W 330 nt3.5□□□□□ -1.85
TDP1P38319 PAU13YHL046C 363 nt3.5□□□□□ -1.85
TDP1P38319 PCL5YHR071W 690 nt3.5□□□□□ -1.85
TDP1P38319 UNG1YML021C 1080 nt3.5□□□□□ -1.85
TDP1P38319 RPS16AYMR143W 432 nt3.5□□□□□ -1.85
TDP1P38319 YMR304C-AYMR304C-A 351 nt3.5□□□□□ -1.85
TDP1P38319 YOR121CYOR121C 306 nt3.5□□□□□ -1.85
TDP1P38319 YOR277CYOR277C 309 nt3.5□□□□□ -1.85
TDP1P38319 IRC16YPR038W 360 nt3.5□□□□□ -1.85
TDP1P38319 YBR209WYBR209W 318 nt3.5□□□□□ -1.85
TDP1P38319 BEM4YPL161C 1902 nt3.5□□□□□ -1.85
TDP1P38319 URA2YJL130C 6645 nt3.5□□□□□ -1.85
TDP1P38319 SSF1YHR066W 1362 nt3.5□□□□□ -1.85
TDP1P38319 SHS1YDL225W 1656 nt3.49□□□□□ -1.85
TDP1P38319 YEL057CYEL057C 702 nt3.49□□□□□ -1.85
TDP1P38319 YGR025WYGR025W 303 nt3.49□□□□□ -1.85
TDP1P38319 YIL054WYIL054W 318 nt3.49□□□□□ -1.85
TDP1P38319 RPA12YJR063W 378 nt3.49□□□□□ -1.85
TDP1P38319 SHH3YMR118C 591 nt3.49□□□□□ -1.85
TDP1P38319 YBL039W-BYBL039W-B 180 nt3.49□□□□□ -1.85
TDP1P38319 CDC33YOL139C 642 nt3.49□□□□□ -1.85
TDP1P38319 DAN4YJR151C 3486 nt3.49□□□□□ -1.85
TDP1P38319 COP1YDL145C 3606 nt3.49□□□□□ -1.85
TDP1P38319 RRN6YBL014C 2685 nt3.49□□□□□ -1.85
TDP1P38319 RDS1YCR106W 2499 nt3.49□□□□□ -1.85
TDP1P38319 MSD1YPL104W 1977 nt3.49□□□□□ -1.85
TDP1P38319 CHA4YLR098C 1947 nt3.48□□□□□ -1.85
TDP1P38319 BFR1YOR198C 1413 nt3.48□□□□□ -1.85
TDP1P38319 ARF1YDL192W 546 nt3.48□□□□□ -1.85
TDP1P38319 IRC2YDR112W 309 nt3.48□□□□□ -1.85
TDP1P38319 YDR431WYDR431W 312 nt3.48□□□□□ -1.85
TDP1P38319 tV(CAC)DtV(CAC)D 73 nt3.48□□□□□ -1.85
TDP1P38319 tV(CAC)HtV(CAC)H 73 nt3.48□□□□□ -1.85
TDP1P38319 YJL086CYJL086C 369 nt3.48□□□□□ -1.85
TDP1P38319 YAR029WYAR029W 225 nt3.48□□□□□ -1.85
TDP1P38319 RPL6BYLR448W 531 nt3.48□□□□□ -1.85
TDP1P38319 PKR1YMR123W 369 nt3.48□□□□□ -1.85
TDP1P38319 OST2YOR103C 393 nt3.48□□□□□ -1.85
TDP1P38319 TRS120YDR407C 3870 nt3.48□□□□□ -1.85
TDP1P38319 BI4Q0120 1917 nt3.48□□□□□ -1.85
TDP1P38319 NDC80YIL144W 2076 nt3.47□□□□□ -1.85
TDP1P38319 RTR2YDR066C 591 nt3.47□□□□□ -1.85
TDP1P38319 INO4YOL108C 456 nt3.47□□□□□ -1.85
TDP1P38319 SWT1YOR166C 1377 nt3.47□□□□□ -1.85
TDP1P38319 MDM36YPR083W 1740 nt3.47□□□□□ -1.85
TDP1P38319 GNT1YOR320C 1476 nt3.47□□□□□ -1.85
TDP1P38319 ARG5,6YER069W 2592 nt3.47□□□□□ -1.85
TDP1P38319 MAK5YBR142W 2322 nt3.47□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms