Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.7■□□□□ 0.74
RORAP35398 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RORAP35398 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.7■□□□□ 0.74
RORAP35398 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.7■□□□□ 0.74
RORAP35398 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.7■□□□□ 0.74
RORAP35398 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
RORAP35398 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.7■□□□□ 0.74
RORAP35398 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RORAP35398 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RORAP35398 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RORAP35398 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.69■□□□□ 0.74
RORAP35398 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
RORAP35398 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RORAP35398 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RORAP35398 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RORAP35398 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.69■□□□□ 0.74
RORAP35398 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.69■□□□□ 0.74
RORAP35398 MIR4651-201ENST00000582622 73 ntBASIC19.69■□□□□ 0.74
RORAP35398 FAM21FP-204ENST00000608637 956 ntBASIC19.69■□□□□ 0.74
RORAP35398 MYC-209ENST00000641252 345 ntBASIC19.69■□□□□ 0.74
RORAP35398 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RORAP35398 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.68■□□□□ 0.74
RORAP35398 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RORAP35398 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RORAP35398 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.68■□□□□ 0.74
RORAP35398 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.68■□□□□ 0.74
RORAP35398 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.68■□□□□ 0.74
RORAP35398 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.68■□□□□ 0.74
RORAP35398 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.68■□□□□ 0.74
RORAP35398 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RORAP35398 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
RORAP35398 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.68■□□□□ 0.74
RORAP35398 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
RORAP35398 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
RORAP35398 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RORAP35398 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.67■□□□□ 0.74
RORAP35398 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RORAP35398 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.67■□□□□ 0.74
RORAP35398 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.67■□□□□ 0.74
RORAP35398 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.67■□□□□ 0.74
RORAP35398 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.67■□□□□ 0.74
RORAP35398 TMEM191A-211ENST00000637163 1067 ntBASIC19.67■□□□□ 0.74
RORAP35398 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.67■□□□□ 0.74
RORAP35398 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RORAP35398 FBXW4P1-201ENST00000426721 2239 ntBASIC19.67■□□□□ 0.74
RORAP35398 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RORAP35398 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RORAP35398 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.67■□□□□ 0.74
RORAP35398 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RORAP35398 CDV3P1-201ENST00000471403 739 ntBASIC19.66■□□□□ 0.74
RORAP35398 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.66■□□□□ 0.74
RORAP35398 AC083880.1-201ENST00000608266 535 ntBASIC19.66■□□□□ 0.74
RORAP35398 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RORAP35398 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RORAP35398 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RORAP35398 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RORAP35398 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RORAP35398 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RORAP35398 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RORAP35398 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RORAP35398 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms