Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARSP26640 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VARSP26640 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.31■□□□□ 0.84
VARSP26640 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
VARSP26640 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.31■□□□□ 0.84
VARSP26640 EEF1DP3-203ENST00000566025 782 ntBASIC20.31■□□□□ 0.84
VARSP26640 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.31■□□□□ 0.84
VARSP26640 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARSP26640 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VARSP26640 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.3■□□□□ 0.84
VARSP26640 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.3■□□□□ 0.84
VARSP26640 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.3■□□□□ 0.84
VARSP26640 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.3■□□□□ 0.84
VARSP26640 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.3■□□□□ 0.84
VARSP26640 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 KRT87P-202ENST00000534226 1464 ntBASIC20.3■□□□□ 0.84
VARSP26640 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARSP26640 AL157384.1-201ENST00000445995 2473 ntBASIC20.29■□□□□ 0.84
VARSP26640 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
VARSP26640 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.29■□□□□ 0.84
VARSP26640 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
VARSP26640 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VARSP26640 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VARSP26640 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.29■□□□□ 0.84
VARSP26640 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARSP26640 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.29■□□□□ 0.84
VARSP26640 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARSP26640 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARSP26640 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARSP26640 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
VARSP26640 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.28■□□□□ 0.84
VARSP26640 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.28■□□□□ 0.84
VARSP26640 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.28■□□□□ 0.84
VARSP26640 AC053503.5-201ENST00000601508 636 ntBASIC20.28■□□□□ 0.84
VARSP26640 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.28■□□□□ 0.84
VARSP26640 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARSP26640 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARSP26640 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VARSP26640 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
VARSP26640 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VARSP26640 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VARSP26640 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
VARSP26640 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VARSP26640 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARSP26640 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARSP26640 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VARSP26640 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.27■□□□□ 0.84
VARSP26640 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.27■□□□□ 0.84
VARSP26640 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARSP26640 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.27■□□□□ 0.84
VARSP26640 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.27■□□□□ 0.84
VARSP26640 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VARSP26640 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
VARSP26640 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VARSP26640 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VARSP26640 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VARSP26640 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.26■□□□□ 0.83
VARSP26640 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
VARSP26640 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
VARSP26640 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.26■□□□□ 0.83
VARSP26640 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.26■□□□□ 0.83
VARSP26640 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VARSP26640 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.26■□□□□ 0.83
VARSP26640 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms