Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
MMP8P22894 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.85■■□□□ 1.09
MMP8P22894 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
MMP8P22894 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MMP8P22894 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MMP8P22894 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MMP8P22894 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.84■■□□□ 1.09
MMP8P22894 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
MMP8P22894 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.84■■□□□ 1.09
MMP8P22894 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.84■■□□□ 1.09
MMP8P22894 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.84■■□□□ 1.09
MMP8P22894 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.84■■□□□ 1.09
MMP8P22894 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
MMP8P22894 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP8P22894 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.83■■□□□ 1.09
MMP8P22894 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.83■■□□□ 1.09
MMP8P22894 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MMP8P22894 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MMP8P22894 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
MMP8P22894 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
MMP8P22894 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MMP8P22894 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MMP8P22894 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MMP8P22894 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
MMP8P22894 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MMP8P22894 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.83■■□□□ 1.09
MMP8P22894 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MMP8P22894 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.83■■□□□ 1.09
MMP8P22894 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MMP8P22894 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MMP8P22894 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
MMP8P22894 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MMP8P22894 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.83■■□□□ 1.08
MMP8P22894 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MMP8P22894 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.83■■□□□ 1.08
MMP8P22894 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
MMP8P22894 AL157384.1-201ENST00000445995 2473 ntBASIC21.82■■□□□ 1.08
MMP8P22894 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MMP8P22894 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MMP8P22894 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.82■■□□□ 1.08
MMP8P22894 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.82■■□□□ 1.08
MMP8P22894 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.82■■□□□ 1.08
MMP8P22894 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.82■■□□□ 1.08
MMP8P22894 MYCNOS-205ENST00000641950 531 ntBASIC21.82■■□□□ 1.08
MMP8P22894 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MMP8P22894 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
MMP8P22894 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP8P22894 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP8P22894 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
MMP8P22894 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.81■■□□□ 1.08
MMP8P22894 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.81■■□□□ 1.08
MMP8P22894 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP8P22894 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MMP8P22894 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.81■■□□□ 1.08
MMP8P22894 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.81■■□□□ 1.08
MMP8P22894 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.81■■□□□ 1.08
MMP8P22894 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.81■■□□□ 1.08
MMP8P22894 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP8P22894 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP8P22894 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.8■■□□□ 1.08
MMP8P22894 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 FEM1AP1-201ENST00000431297 1995 ntBASIC21.8■■□□□ 1.08
MMP8P22894 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.8■■□□□ 1.08
MMP8P22894 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.8■■□□□ 1.08
MMP8P22894 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
MMP8P22894 AC091799.1-201ENST00000422823 811 ntBASIC21.8■■□□□ 1.08
MMP8P22894 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.8■■□□□ 1.08
MMP8P22894 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.8■■□□□ 1.08
MMP8P22894 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.8■■□□□ 1.08
MMP8P22894 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
MMP8P22894 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
MMP8P22894 AC007225.1-201ENST00000566331 1836 ntBASIC21.8■■□□□ 1.08
MMP8P22894 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MMP8P22894 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.8■■□□□ 1.08
MMP8P22894 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP8P22894 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MMP8P22894 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MMP8P22894 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MMP8P22894 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MMP8P22894 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP8P22894 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.79■■□□□ 1.08
MMP8P22894 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MMP8P22894 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP8P22894 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
MMP8P22894 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms