Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.13■□□□□ 0.81
PCNAP12004 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.13■□□□□ 0.81
PCNAP12004 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNAP12004 CCDC92B-201ENST00000575506 885 ntBASIC20.13■□□□□ 0.81
PCNAP12004 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.13■□□□□ 0.81
PCNAP12004 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNAP12004 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCNAP12004 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.13■□□□□ 0.81
PCNAP12004 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCNAP12004 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.13■□□□□ 0.81
PCNAP12004 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.12■□□□□ 0.81
PCNAP12004 AC061975.6-201ENST00000579045 1553 ntBASIC20.12■□□□□ 0.81
PCNAP12004 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCNAP12004 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCNAP12004 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.12■□□□□ 0.81
PCNAP12004 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.12■□□□□ 0.81
PCNAP12004 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 KRT18P14-201ENST00000534205 1250 ntBASIC20.12■□□□□ 0.81
PCNAP12004 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCNAP12004 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCNAP12004 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.12■□□□□ 0.81
PCNAP12004 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCNAP12004 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.11■□□□□ 0.81
PCNAP12004 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCNAP12004 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.11■□□□□ 0.81
PCNAP12004 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.11■□□□□ 0.81
PCNAP12004 TERF1P2-201ENST00000583350 1212 ntBASIC20.11■□□□□ 0.81
PCNAP12004 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.11■□□□□ 0.81
PCNAP12004 AC008175.2-201ENST00000612840 297 ntBASIC20.11■□□□□ 0.81
PCNAP12004 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.11■□□□□ 0.81
PCNAP12004 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCNAP12004 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCNAP12004 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCNAP12004 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.1■□□□□ 0.81
PCNAP12004 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.1■□□□□ 0.81
PCNAP12004 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCNAP12004 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCNAP12004 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.1■□□□□ 0.81
PCNAP12004 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.1■□□□□ 0.81
PCNAP12004 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.1■□□□□ 0.81
PCNAP12004 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.1■□□□□ 0.81
PCNAP12004 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.1■□□□□ 0.81
PCNAP12004 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.1■□□□□ 0.81
PCNAP12004 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCNAP12004 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCNAP12004 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.1■□□□□ 0.81
PCNAP12004 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNAP12004 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PCNAP12004 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCNAP12004 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.09■□□□□ 0.81
PCNAP12004 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.09■□□□□ 0.81
PCNAP12004 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.09■□□□□ 0.81
PCNAP12004 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCNAP12004 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.09■□□□□ 0.81
PCNAP12004 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
PCNAP12004 AP004607.4-201ENST00000530158 1459 ntBASIC20.09■□□□□ 0.81
PCNAP12004 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.09■□□□□ 0.81
PCNAP12004 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCNAP12004 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.09■□□□□ 0.81
PCNAP12004 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PCNAP12004 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCNAP12004 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
PCNAP12004 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
PCNAP12004 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.08■□□□□ 0.81
PCNAP12004 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCNAP12004 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.08■□□□□ 0.81
PCNAP12004 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms